Parental gene:

MMU.9723, ENSMMUG00000015278

Aliases:None
Description:coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial [Source:RefSeq peptide;Acc:NP_001185668]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:3:70020480..70025336(+)


>ENSMMUG00000015278
ATGCCGCGTGGAAGCCGAAGCCGCACCTCCCGCATGGCCCCTCCGGCCAGCCGGGCACCGCAGATGAGAGCTGCACCCAG
GCCGGCACCTGTCGCTCAGCCACCAGCAGCAGCACCCCCATCTGCAGTTGGCTCTTCTGCTGCTGCACCCCGGCAGCCAG
GTCTGATGGCCCAGATGGCAACCACTGCAGCTGGCGTGGCTGTGGGCTCTGCTGTGGGACACACACTGGGTCATGCCATT
ACTGGGGGCTTCAGTGGAGGAAGTAATGCTGAGCCTGCGAGTCCTGACATCACTTACCAGGAGCCACAGGGAACCCAGCT
GCCACAGCAGCAGCAGCCTTGCTTCTATGAGATCAAACAGTTTCTGGAGTGTGCCCAGAACCAGGGTGACATCAAGCTCT
GTGAGGGTTTCAATGAGGTGCTGAAACAGTGCCGACTTGCAAACGGATTGGCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 33 .05 RPM
SRP007412_brain_prefrontal_cortex 46 .73 RPM
SRP007412_cerebellum 21 .83 RPM
SRP007412_heart 34 .92 RPM
SRP007412_kidney 24 .18 RPM
SRP007412_liver 33 .25 RPM
SRP007412_testis 10 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016050 ortholog_one2many 2 retrogenes
retro_amel_500, retro_amel_976,
Bos taurus ENSBTAG00000040295 ortholog_one2many 2 retrogenes
retro_btau_397, retro_btau_768,
Canis familiaris ENSCAFG00000010178 ortholog_one2many 1 retrogene
retro_cfam_1653,
Callithrix jacchus ENSCJAG00000021267 ortholog_many2many 1 retrogene
retro_cjac_271,
Erinaceus europaeus ENSEEUG00000012857 ortholog_many2many 1 retrogene
retro_eeur_398,
Echinops telfairi ENSETEG00000008598 ortholog_many2many 1 retrogene
retro_etel_45,
Myotis lucifugus ENSMLUG00000015151 ortholog_many2many 1 retrogene
retro_mluc_345,
Mus musculus ENSMUSG00000070493 ortholog_one2many 2 retrogenes
retro_mmus_2340, retro_mmus_2536,
Otolemur garnettii ENSOGAG00000010097 ortholog_many2many 5 retrogenes
retro_ogar_1161, retro_ogar_158, retro_ogar_1848, retro_ogar_2837, retro_ogar_34,
Sus scrofa ENSSSCG00000007743 ortholog_one2many 1 retrogene
retro_sscr_515,
Ictidomys tridecemlineatus ENSSTOG00000010512 ortholog_many2many 3 retrogenes
retro_itri_1870, retro_itri_670, retro_itri_671,
Tupaia belangeri ENSTBEG00000012905 ortholog_one2many 15 retrogenes
retro_tbel_1728, retro_tbel_1891, retro_tbel_2513, retro_tbel_2593, retro_tbel_2596, retro_tbel_2658, retro_tbel_3331, retro_tbel_3764, retro_tbel_3777, retro_tbel_3954, retro_tbel_4082, retro_tbel_4368, retro_tbel_4487, retro_tbel_4728, retro_tbel_817,
Tursiops truncatus ENSTTRG00000015185 ortholog_one2many 1 retrogene
retro_ttru_520,
Vicugna pacos ENSVPAG00000006104 ortholog_one2many 1 retrogene
retro_vpac_48,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_160 94.70 100.00
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2. retro_mmul_302 97.99 98.68
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Download FASTA sequences of all ENSMMUG00000015278 retrocopies