RetrogeneDB ID: | retro_lafr_537 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_2:87957807..87958153(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSLAFG00000002515 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.75 % |
Parental protein coverage: | 98.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVK-GPVRMPTKTLRITTRKTPC |
.FK.T.K...E.EVAIH.I.I.LTS.NVKSLEKVCADLIRG.KEKNL..K.G.VR.PTKTLRIT.RK.PC | |
Retrocopy | SFKGTEKMLMESEVAIH*IQIPLTSHNVKSLEKVCADLIRGRKEKNL-IK<GMVRTPTKTLRITMRKVPC |
Parental | GEGSKTWDRFQMRIHKR-LIDLHSPSEIVKQITSISIEPGVEVEVTIAD |
G.GSKTW..FQMRIHK...I.LH.PSE..KQITSI....GV.V.VT.AD | |
Retrocopy | GKGSKTWRCFQMRIHKQ<TINLHGPSESLKQITSIGTASGVNVKVTVAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |