RetrogeneDB ID: | retro_lafr_378 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_14:49070981..49071275(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSLAFG00000002515 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.32 % |
Parental protein coverage: | 83.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | IRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCG-EGSKTWDRFQMRIHK-R |
.RITLTS..VKS.E.VCA.LIRG.KEK.LKVK.P...PTK.LR.T.RKTPC....SKTWD.FQMRI.K.. | |
Retrocopy | VRITLTSWDVKSME-VCANLIRGRKEKKLKVKRPISLPTKILRFTMRKTPCR<KDSKTWDHFQMRIFK>G |
Parental | LIDLHSPSEIVKQITSISIEPGVEVEVTIAD |
L......S.IVKQ.TSISI.PGVEVEVTIAD | |
Retrocopy | LSNMYRHSKIVKQTTSISIQPGVEVEVTIAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |