Parental gene: | SNRPF, ENSMODG00000008091 |
| Aliases: | None |
| Description: | small nuclear ribonucleoprotein polypeptide F [Source:HGNC Symbol;Acc:11162] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 8:72887758..72892364(+) |
>ENSMODG00000008091
GGAGGCAGGAGCGGCAGCGGCTTGCTTCACGTCGGGGCTGGAGAATCGGAGGCTGAAGGCCCACGGCGCTCTTCGGTGGT
CACGATGAGTTTACCCCTCAACCCCAAGCCATTCCTGAATGGACTGACAGGGAAGCCAGTGATGGTGAAGCTTAAGTGGG
GAATGGAGTACAAAGGTTACCTGGTATCTGTGGATGGCTACATGAACATGCAACTTGCAAATACAGAAGAATACATAGAT
GGGGCATTGTCTGGACACCTTGGCGAAGTTTTAATAAGGTGCAATAATGTCCTTTACATCAGAGGTGTTGAAGAAGAGGA
AGAAGATGGGGAAATGAGAGAATAG
GGAGGCAGGAGCGGCAGCGGCTTGCTTCACGTCGGGGCTGGAGAATCGGAGGCTGAAGGCCCACGGCGCTCTTCGGTGGT
CACGATGAGTTTACCCCTCAACCCCAAGCCATTCCTGAATGGACTGACAGGGAAGCCAGTGATGGTGAAGCTTAAGTGGG
GAATGGAGTACAAAGGTTACCTGGTATCTGTGGATGGCTACATGAACATGCAACTTGCAAATACAGAAGAATACATAGAT
GGGGCATTGTCTGGACACCTTGGCGAAGTTTTAATAAGGTGCAATAATGTCCTTTACATCAGAGGTGTTGAAGAAGAGGA
AGAAGATGGGGAAATGAGAGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002166 | possible_ortholog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000006395 | possible_ortholog | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000002705 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000029966 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000000526 | within_species_paralog | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006837 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_550 | 67.82 | 76.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_780 | 93.15 | 64.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_811 | 60.24 | 71.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000008091 retrocopies