Parental gene:

Mapre1, ENSMUSG00000027479

Aliases:Mapre1, 5530600P05Rik, AI462499, AI504412, AW260097, BIM1p, D2Ertd459e, Eb1
Description:microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
Organism:Mouse (Mus musculus)
Coordinates:2:153741273..153773310(+)


>ENSMUSG00000027479
ATGGCAGTGAATGTGTACTCTACGTCAGTCACCAGTGATAACCTAAGTCGACATGACATGCTGGCTTGGATCAATGAATC
TCTGCAGTTGAATCTGACAAAGATAGAACAGTTGTGTTCAGGGGCTGCATATTGTCAGTTTATGGACATGCTCTTCCCTG
GATCCATTGCCTTGAAGAAAGTGAAATTCCAAGCTAAGCTAGAACATGAATATATCCAGAACTTCAAAATACTACAAGCA
GGCTTCAAGAGGATGGGCGTTGACAAAATAATTCCTGTGGATAAATTAGTAAAAGGAAAATTTCAGGACAATTTTGAATT
TGTTCAATGGTTCAAGAAGTTTTTTGATGCAAATTATGATGGAAAAGAGTATGATCCTGTAGCTGCCAGACAAGGTCAAG
AAACTGCAGTGGCTCCTTCTCTTGTCGCCCCAGCTTTGAGTAAACCGAAGAAACCTCTCGGCTCCAGTACTGCAGCCCCA
CAGAGACCCATTGCAACACAGAGGACTACTGCAGCTCCTAAGGCTGGCCCCGGAATGGTGCGAAAGAATCCTGGTGTGGG
CAATGGAGATGATGAAGCAGCTGAATTGATGCAGCAGGTCAAAGTACTGAAGCTTACTGTTGAAGACTTGGAGAAGGAGA
GAGACTTCTACTTCGGAAAGCTAAGGAACATTGAACTGATTTGCCAGGAGAACGAGGGGGAAAACGACCCTGTACTGCAG
AGGATTGTAGATATTCTTTATGCCACAGATGAAGGCTTTGTGATACCTGATGAAGGGGGCCCACAGGAGGAACAAGAAGA
GTATTAA

Library Parental gene expression (RPM)
SRP007412_brain 75 .70 RPM
SRP007412_cerebellum 52 .41 RPM
SRP007412_heart 62 .26 RPM
SRP007412_kidney 78 .35 RPM
SRP007412_liver 30 .01 RPM
SRP007412_testis 52 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013238 possible_ortholog 3 retrogenes
retro_amel_1187, retro_amel_1436, retro_amel_848,
Canis familiaris ENSCAFG00000007306 possible_ortholog 13 retrogenes
retro_cfam_1338, retro_cfam_1554, retro_cfam_1665, retro_cfam_1804, retro_cfam_1808, retro_cfam_2084, retro_cfam_2163, retro_cfam_241, retro_cfam_547, retro_cfam_762, retro_cfam_774, retro_cfam_806, retro_cfam_913,
Callithrix jacchus ENSCJAG00000015601 possible_ortholog 10 retrogenes
retro_cjac_1424, retro_cjac_1647, retro_cjac_1946, retro_cjac_2077, retro_cjac_2084, retro_cjac_2366, retro_cjac_2861, retro_cjac_3259, retro_cjac_3271, retro_cjac_3308,
Cavia porcellus ENSCPOG00000023542 ortholog_one2many 1 retrogene
retro_cpor_194,
Erinaceus europaeus ENSEEUG00000004499 ortholog_one2one 1 retrogene
retro_eeur_179,
Echinops telfairi ENSETEG00000017922 ortholog_one2one 4 retrogenes
retro_etel_1747, retro_etel_1778, retro_etel_2148, retro_etel_222,
Gorilla gorilla ENSGGOG00000022496 possible_ortholog 1 retrogene
retro_ggor_2765,
Monodelphis domestica ENSMODG00000019445 ortholog_one2one 3 retrogenes
retro_mdom_1213, retro_mdom_1946, retro_mdom_431,
Otolemur garnettii ENSOGAG00000026557 possible_ortholog 2 retrogenes
retro_ogar_226, retro_ogar_2290,
Sorex araneus ENSSARG00000002368 ortholog_one2one 1 retrogene
retro_sara_380,
Drosophila melanogaster FBgn0027066 ortholog_many2many 1 retrogene
retro_dmel_83,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3160 83.67 92.54
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2. retro_mmus_3466 90.34 77.24
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Download FASTA sequences of all ENSMUSG00000027479 retrocopies