Parental gene: | Gpd1l, ENSMUSG00000050627 |
| Aliases: | Gpd1l, 2210409H23Rik, D9Ertd660e |
| Description: | glycerol-3-phosphate dehydrogenase 1-like [Source:MGI Symbol;Acc:MGI:1289257] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:114899340..114933987(-) |
>ENSMUSG00000050627
ATGGCAGCGGCGCCTCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGATCAGCTGTTGCAAAAATCATCGGCAGCAA
CGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGAGGAGACCGTGAACGGGAGGAAGCTGACAG
ACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAAC
CTCAGCGAAGCCGTGCAGGACGCGGACCTGCTGGTGTTCGTCATCCCTCACCAGTTCATCCACAAGATCTGCGATGAGAT
CACGGGCAGGGTGCCCGAGAAGGCCCTGGGGATCACCCTCATCAAGGGCATAGATGAGGGCCCCGACGGGCTGAAGCTAA
TCTCCGACATCATCCGAGAGAAGATGGGGATCGACATCAGTGTGCTGATGGGGGCCAACATCGCCAGTGAGGTCGCTGCG
GAGAAGTTCTGCGAGACCACCATTGGCAGCAAAGTGATGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAA
CTTCAGAATCACTGTGGTAGACGATGCAGACACCGTGGAGCTTTGCGGTGCTCTTAAGAACATTGTTGCTGTGGGAGCTG
GCTTCTGCGACGGCCTCCGCTGTGGGGACAACACCAAGGCGGCCGTCATACGCCTGGGCCTCATGGAAATGATCGCTTTC
GCCAAGATCTTCTGTAAGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCTGCGGGGTGGCTGACCTCATCACCACCTG
CTACGGAGGGCGGAACCGCAGGGTGGCAGAGGCCTTCGCCAGGACTGGGAAGACCATCGAAGAGCTGGAGAAGGAGCTGC
TGAACGGGCAGAAGCTGCAGGGACCTCAGACCTCTGCGGAGGTGTACCGCATCCTCAGGCAGAAGGGGCTGCTGGACAAG
TTTCCCCTCTTCACTGCAGTGTATCAGATCTGCTATGAAGGCAGGCCTGTCACGCAGATGCTGTCCTGCCTGCAGAGCCA
CCCAGAGCACATCTGA
ATGGCAGCGGCGCCTCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGATCAGCTGTTGCAAAAATCATCGGCAGCAA
CGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGAGGAGACCGTGAACGGGAGGAAGCTGACAG
ACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAAC
CTCAGCGAAGCCGTGCAGGACGCGGACCTGCTGGTGTTCGTCATCCCTCACCAGTTCATCCACAAGATCTGCGATGAGAT
CACGGGCAGGGTGCCCGAGAAGGCCCTGGGGATCACCCTCATCAAGGGCATAGATGAGGGCCCCGACGGGCTGAAGCTAA
TCTCCGACATCATCCGAGAGAAGATGGGGATCGACATCAGTGTGCTGATGGGGGCCAACATCGCCAGTGAGGTCGCTGCG
GAGAAGTTCTGCGAGACCACCATTGGCAGCAAAGTGATGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAA
CTTCAGAATCACTGTGGTAGACGATGCAGACACCGTGGAGCTTTGCGGTGCTCTTAAGAACATTGTTGCTGTGGGAGCTG
GCTTCTGCGACGGCCTCCGCTGTGGGGACAACACCAAGGCGGCCGTCATACGCCTGGGCCTCATGGAAATGATCGCTTTC
GCCAAGATCTTCTGTAAGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCTGCGGGGTGGCTGACCTCATCACCACCTG
CTACGGAGGGCGGAACCGCAGGGTGGCAGAGGCCTTCGCCAGGACTGGGAAGACCATCGAAGAGCTGGAGAAGGAGCTGC
TGAACGGGCAGAAGCTGCAGGGACCTCAGACCTCTGCGGAGGTGTACCGCATCCTCAGGCAGAAGGGGCTGCTGGACAAG
TTTCCCCTCTTCACTGCAGTGTATCAGATCTGCTATGAAGGCAGGCCTGTCACGCAGATGCTGTCCTGCCTGCAGAGCCA
CCCAGAGCACATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 107 .73 RPM |
| SRP007412_cerebellum | 64 .83 RPM |
| SRP007412_heart | 63 .60 RPM |
| SRP007412_kidney | 57 .88 RPM |
| SRP007412_liver | 34 .68 RPM |
| SRP007412_testis | 6 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009826 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000012633 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000013996 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011060 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000010093 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013243 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016132 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000026455 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021977 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1348 | 71.51 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2552 | 79.43 | 99.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3695 | 81.87 | 51.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000050627 retrocopies