Parental gene: | Gpd1l, ENSRNOG00000026455 |
| Aliases: | None |
| Description: | glycerol-3-phosphate dehydrogenase 1-like protein [Source:RefSeq peptide;Acc:NP_001178814] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:122268133..122300375(-) |
>ENSRNOG00000026455
ATGGCAGCGGCGCCTCTGAAAGTGTGCATCGTGGGCTCCGGGAACTGGGGATCAGCTGTTGCAAAAATCATCGGAAGCAA
TGTGAAGAACCTGCAGAAGTTCTCCTCCACGGTCAAGATGTGGGTCTTCGAAGAGACTGTGAACGGGAGGAAGTTGACAG
ACATCATCAACAATGACCACGAAAATGTGAAATATCTCCCGGGACACAAGCTACCAGAAAATGTGGTCGCTGTCCCAAAT
CTCGGCGAAGCCGTGCAGGACGCAGACCTGTTGGTGTTCGTTATCCCCCACCAGTTCATTCACAAGATCTGCGATGAGAT
CACGGGCAGGGTGCCCAAGAAGGCCGTGGGAATCACCCTCATCAAGGGTATAGATGAGGGCCCGGACGGGCTGAAGCTCA
TCTCCGACATCATCCGGGAGAAGATGGGGATTGACATCAGTGTGCTGATGGGGGCCAACATCGCCAGCGAGGTCGCTGCG
GAGAAGTTCTGCGAGACCACCATTGGCAGCAAAGTGTTGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAA
TTTCAGAATCACGGTGGTGGATGATGCAGACACCGTGGAACTCTGCGGTGCTCTTAAGAACATTGTTGCTGTGGGAGCCG
GCTTCTGCGATGGCCTCTGCTGTGGGGACAACACCAAGGCAGCCGTCATCCGCCTGGGCCTCATGGAAATGATCGCTTTC
GCCAAGATCTTCTGTAAGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCTGCGGGGTGGCCGACCTCATCACCACCTG
CTACGGAGGGCGGAACCGCAAGGTGGCAGAAGCCTTCGCCAGGACCGGGAAGACCATCGAAGAGCTGGAGAAGGAGCTGC
TGAACGGACAGAAGCTCCAGGGACCTCAGACCTCTGCGGAGGTGTACCGCATCCTCAAGCAGAAGGGGCTGCTGGACAAG
TTTCCCCTCTTCACTGCCGTGTATCAGATCTGCTATGAAGGCAGACCTGTCACCCAGATGCTGTCCTGCCTGCAGAGCCA
CCCGGAGCACATCTGA
ATGGCAGCGGCGCCTCTGAAAGTGTGCATCGTGGGCTCCGGGAACTGGGGATCAGCTGTTGCAAAAATCATCGGAAGCAA
TGTGAAGAACCTGCAGAAGTTCTCCTCCACGGTCAAGATGTGGGTCTTCGAAGAGACTGTGAACGGGAGGAAGTTGACAG
ACATCATCAACAATGACCACGAAAATGTGAAATATCTCCCGGGACACAAGCTACCAGAAAATGTGGTCGCTGTCCCAAAT
CTCGGCGAAGCCGTGCAGGACGCAGACCTGTTGGTGTTCGTTATCCCCCACCAGTTCATTCACAAGATCTGCGATGAGAT
CACGGGCAGGGTGCCCAAGAAGGCCGTGGGAATCACCCTCATCAAGGGTATAGATGAGGGCCCGGACGGGCTGAAGCTCA
TCTCCGACATCATCCGGGAGAAGATGGGGATTGACATCAGTGTGCTGATGGGGGCCAACATCGCCAGCGAGGTCGCTGCG
GAGAAGTTCTGCGAGACCACCATTGGCAGCAAAGTGTTGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAA
TTTCAGAATCACGGTGGTGGATGATGCAGACACCGTGGAACTCTGCGGTGCTCTTAAGAACATTGTTGCTGTGGGAGCCG
GCTTCTGCGATGGCCTCTGCTGTGGGGACAACACCAAGGCAGCCGTCATCCGCCTGGGCCTCATGGAAATGATCGCTTTC
GCCAAGATCTTCTGTAAGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCTGCGGGGTGGCCGACCTCATCACCACCTG
CTACGGAGGGCGGAACCGCAAGGTGGCAGAAGCCTTCGCCAGGACCGGGAAGACCATCGAAGAGCTGGAGAAGGAGCTGC
TGAACGGACAGAAGCTCCAGGGACCTCAGACCTCTGCGGAGGTGTACCGCATCCTCAAGCAGAAGGGGCTGCTGGACAAG
TTTCCCCTCTTCACTGCCGTGTATCAGATCTGCTATGAAGGCAGACCTGTCACCCAGATGCTGTCCTGCCTGCAGAGCCA
CCCGGAGCACATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .79 RPM |
| SRP017611_kidney | 105 .58 RPM |
| SRP017611_brain | 82 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009826 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000012633 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000013996 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011060 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000050627 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010093 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013243 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016132 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021977 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2035 | 80.92 | 98.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2474 | 74.36 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000026455 retrocopies