Parental gene:

CYB5A, ENSPPYG00000009240

Aliases:None
Description:cytochrome b5 type A (microsomal) [Source:HGNC Symbol;Acc:2570]
Organism:Orangutan (Pongo abelii)
Coordinates:18:87838272..87884073(-)


>ENSPPYG00000009240
ATGGCAGAGCAGTCGGACGAGGCCGTGAAGTACTACACCCTGGAGGAGATTCAGAAGCACAACCACAACAAGAGCACCTG
GCTGATCCTGCACCACAAGGTGTACGATTTAACCAAATTTCTGGAAGAGCATCCTGGTGGGGAAGAAGTTTTAAGGGAAC
AAGCTGGAGGTGACGCTACTGAGAACTTTGAGGATGTCGGGCACTCTACAGATGCCAGGGAAATGTCCAAAACATTCATC
ATTGGGGAGCTCCATCCAGATGACAGACCAAAGTTAAACAAGCCTCCGGAAACTCTTATCACTACTGTTGATTCTAGTTC
CAGTTGGTGGACCAACTGGGTGATCCCTGCCATCTCTGCAGTGGCCGTTGCCTTGATGTATCGCCTGTACGTGGCGGAAG
ACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .55 RPM
SRP007412_cerebellum 10 .82 RPM
SRP007412_heart 14 .48 RPM
SRP007412_kidney 427 .13 RPM
SRP007412_liver 464 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013614 ortholog_one2one 2 retrogenes
Canis familiaris ENSCAFG00000000026 ortholog_one2many 2 retrogenes
Choloepus hoffmanni ENSCHOG00000000359 ortholog_one2one 2 retrogenes
Callithrix jacchus ENSCJAG00000003163 ortholog_one2one 3 retrogenes
Cavia porcellus ENSCPOG00000012111 ortholog_one2one 1 retrogene
Equus caballus ENSECAG00000017581 possible_ortholog 1 retrogene
Erinaceus europaeus ENSEEUG00000010683 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000000691 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000166347 ortholog_one2one 3 retrogenes
Gorilla gorilla ENSGGOG00000007968 ortholog_one2one 1 retrogene
Macropus eugenii ENSMEUG00000015899 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000011462 ortholog_one2one 5 retrogenes
Macaca mulatta ENSMMUG00000013607 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000016630 ortholog_one2one 1 retrogene
Mus musculus ENSMUSG00000024646 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000009232 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000000052 ortholog_one2one 4 retrogenes
Ochotona princeps ENSOPRG00000011584 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000007506 within_species_paralog 1 retrogene
Pan troglodytes ENSPTRG00000010111 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000015205 ortholog_one2many 2 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000022436 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000014998 ortholog_one2one 3 retrogenes
Tarsius syrichta ENSTSYG00000002241 ortholog_one2one 1 retrogene
Tursiops truncatus ENSTTRG00000015272 ortholog_one2one 1 retrogene
Drosophila melanogaster FBgn0029854 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1094 69.57 51.49
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2. retro_pabe_1140 80.21 70.90
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Download FASTA sequences of all ENSPPYG00000009240 retrocopies