Parental gene:

MYL6, ENSPTRG00000005080

Aliases:None
Description:myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:HGNC Symbol;Acc:7587]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:33202059..33204955(-)


>ENSPTRG00000005080
CAGTGTGACTTCACCGAAGACCAGACCGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGACCGAACAGGTGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGATGTGATGAGGGCCCTGGGCCAGAACCCTACCAACGCCGAGGTGCTCAAGGTCCTGGGGA
ACCCCAAGAGTGATGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTTCTGCCCATGCTGCAGACAGTGGCCAAGAAC
AAGGACCAGGGCACCTATGAGGATTATGTCGAAGGACTTCGGGTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGC
TGAAATCCGGCATGTTCTTGTCACACTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTGGTGGCAGGGCATGAGG
ACAGCAATGGTTGTATCAACTATGAAGCGTTTGTGAGGCATATCCTGTCGGGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 278 .04 RPM
SRP007412_cerebellum 194 .80 RPM
SRP007412_heart 205 .71 RPM
SRP007412_kidney 841 .02 RPM
SRP007412_liver 484 .63 RPM
SRP007412_testis 116 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000092841 ortholog_one2one 2 retrogenes
retro_hsap_1786, retro_hsap_2533,
Macropus eugenii ENSMEUG00000001272 ortholog_one2one 1 retrogene
retro_meug_2172,
Macaca mulatta ENSMMUG00000031838 ortholog_one2one 6 retrogenes
retro_mmul_1633, retro_mmul_1663, retro_mmul_211, retro_mmul_2221, retro_mmul_2410, retro_mmul_96,
Nomascus leucogenys ENSNLEG00000000205 ortholog_one2one 2 retrogenes
retro_nleu_2736, retro_nleu_779,
Oryctolagus cuniculus ENSOCUG00000017371 possible_ortholog 1 retrogene
retro_ocun_1300,
Otolemur garnettii ENSOGAG00000034596 possible_ortholog 1 retrogene
retro_ogar_2549,
Pan troglodytes ENSPTRG00000023043 within_species_paralog 2 retrogenes
retro_ptro_1741, retro_ptro_2579,
Sarcophilus harrisii ENSSHAG00000004472 ortholog_one2one 6 retrogenes
retro_shar_137, retro_shar_318, retro_shar_452, retro_shar_510, retro_shar_719, retro_shar_765,
Sus scrofa ENSSSCG00000025467 possible_ortholog 1 retrogene
retro_sscr_829,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1196 87.33 99.34
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2. retro_ptro_1476 75.00 94.70
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Download FASTA sequences of all ENSPTRG00000005080 retrocopies