Parental gene:

Hnrpdl, ENSRNOG00000002270

Aliases:Hnrnpdl, Hnrpdl, hnRNP DL
Description:Heterogeneous nuclear ribonucleoprotein D-like [Source:UniProtKB/Swiss-Prot;Acc:Q3SWU3]
Organism:Rat (Rattus norvegicus)
Coordinates:14:11143238..11146504(+)


>ENSRNOG00000002270
ATGACGGGTACCGCACGCTCCGCTCTTCCCCTCCCCCAGAGCCCCGCGCGCGCCCTTCGTCCCTCTGGAGCCGCGCGCGC
TGCCCCCAGTCTTTCCCCGAGTCGATTCTCCGCGTGCCCGCTGGACCCCAGTAGCTTCCCCACTAGCGGAAATAAAATGT
TTATTGGAGGCTTGAGCTGGGATACAAGCAAGAAAGATCTGACTGAATATTTGTCTCGGTTTGGGGAAGTTGTAGACTGC
ACAATTAAAACAGATCCAGTCACTGGAAGATCAAGAGGATTTGGATTTGTGCTTTTCAAAGATGCTGCTAGTGTGGATAA
GGTTTTGGAACTGAAGGAACACAAACTGGATGGCAAATTGATAGACCCCAAAAGGGCCAAAGCTTTAAAGGGGAAAGAAC
CCCCTAAAAAGGTTTTTGTGGGTGGATTGAGTCCAGATACTTCAGAAGAACAAATTAAAGAATATTTTGGAGCCTTCGGA
GAGATAGAAAACATTGAGCTGCCCATGGATACGAAGACTAATGAGAGAAGAGGATTCTGTTTTATCACATACACAGACGA
AGAGCCAGTAAAGAAACTGTTAGAAAGCAGATACCATCAGATAGGCTCTGGGAAGTGTGAAATCAAAGTTGCACAACCCA
AAGAGGTGTACAGGCAGCAGCAGCAGCAACAGAAAGGTGGAAGAGGGGCTGCGGCTGGTGGAAGAGGTGGTGCTAGGGGA
CGCGGAAGAGGTCAGGGCCAAAACTGGAACCAAGGATTTAATAACTATTATGATCAAGGATATGGAAATTATAATAGTGC
CTATGGTGATGAGAGCTATAGTGGCTATGGCGGCTATGACTATACGGGGTATAACTATGGGAGCTATGGATATGGACAGG
GATATACAGACTACAGCGGTCAGCAGAGCACTTATGGCAAGGCATCCCGAGGGGGTGGCAATCACCAGAACAATTACCAG
CCCTACTAA

Library Parental gene expression (RPM)
SRP017611_brain 109 .64 RPM
SRP017611_kidney 43 .33 RPM
SRP017611_liver 32 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014804 ortholog_one2one 2 retrogenes
retro_btau_1827, retro_btau_461,
Canis familiaris ENSCAFG00000008940 possible_ortholog 1 retrogene
retro_cfam_1086,
Choloepus hoffmanni ENSCHOG00000000160 possible_ortholog 8 retrogenes
retro_chof_115, retro_chof_1470, retro_chof_2108, retro_chof_2370, retro_chof_533, retro_chof_59, retro_chof_741, retro_chof_890,
Choloepus hoffmanni ENSCHOG00000003275 possible_ortholog 2 retrogenes
retro_chof_1578, retro_chof_18,
Cavia porcellus ENSCPOG00000015619 ortholog_one2one 5 retrogenes
retro_cpor_1110, retro_cpor_1318, retro_cpor_264, retro_cpor_274, retro_cpor_567,
Dipodomys ordii ENSDORG00000000968 possible_ortholog 1 retrogene
retro_dord_145,
Equus caballus ENSECAG00000022692 ortholog_one2one 1 retrogene
retro_ecab_1082,
Loxodonta africana ENSLAFG00000008612 possible_ortholog 1 retrogene
retro_lafr_650,
Microcebus murinus ENSMICG00000001445 ortholog_one2one 4 retrogenes
retro_mmur_1016, retro_mmur_1570, retro_mmur_1572, retro_mmur_557,
Myotis lucifugus ENSMLUG00000014452 ortholog_one2one 2 retrogenes
retro_mluc_1140, retro_mluc_1761,
Mustela putorius furo ENSMPUG00000014753 ortholog_one2one 2 retrogenes
retro_mputfur_1359, retro_mputfur_600,
Nomascus leucogenys ENSNLEG00000008636 possible_ortholog 1 retrogene
retro_nleu_673,
Oryctolagus cuniculus ENSOCUG00000013805 ortholog_one2one 1 retrogene
retro_ocun_505,
Otolemur garnettii ENSOGAG00000002501 possible_ortholog 4 retrogenes
retro_ogar_2717, retro_ogar_2791, retro_ogar_437, retro_ogar_693,
Ochotona princeps ENSOPRG00000007178 ortholog_one2one 3 retrogenes
retro_opri_1075, retro_opri_623, retro_opri_703,
Procavia capensis ENSPCAG00000011543 ortholog_one2one 1 retrogene
retro_pcap_366,
Rattus norvegicus ENSRNOG00000001556 other_paralog 11 retrogenes
retro_rnor_1510, retro_rnor_1665, retro_rnor_1869, retro_rnor_2053, retro_rnor_2659, retro_rnor_2669, retro_rnor_2713, retro_rnor_2776, retro_rnor_2809, retro_rnor_348, retro_rnor_959,
Rattus norvegicus ENSRNOG00000011175 within_species_paralog 3 retrogenes
retro_rnor_1824, retro_rnor_2043, retro_rnor_2339,
Rattus norvegicus ENSRNOG00000036839 other_paralog 17 retrogenes
retro_rnor_1001, retro_rnor_1322, retro_rnor_1658, retro_rnor_1770, retro_rnor_1786, retro_rnor_1846, retro_rnor_1987, retro_rnor_2194, retro_rnor_2482, retro_rnor_2551, retro_rnor_2619, retro_rnor_2657, retro_rnor_2881, retro_rnor_2944, retro_rnor_2945, retro_rnor_2965, retro_rnor_2969,
Sorex araneus ENSSARG00000009961 ortholog_one2one 1 retrogene
retro_sara_421,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1365 53.92 64.60
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Download FASTA sequences of all ENSRNOG00000002270 retrocopies