Parental gene:

Rpl17, ENSRNOG00000018680

Aliases:Rpl17, ASI, rpL23
Description:60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:P24049]
Organism:Rat (Rattus norvegicus)
Coordinates:18:70108977..70112081(+)


>ENSRNOG00000018680
ATGGTTCGCTACTCCCTTGACCCAGAAAACCCCACGAAATCATGCAAGTCAAGAGGCTCAAACCTTCGTGTTCACTTTAA
GAACACCCGGGAAACTGCCCAGGCCATCAAGGGTATGCATATCCGCAAAGCCACCAAGTATCTGAAGGATGTCACTTTAA
AGAAGCAGTGTGTGCCATTCCGGCGGTATAATGGTGGAGTTGGTAGGTGCGCCCAGGCCAAACAGTGGGGCTGGACACAG
GGACGGTGGCCAAAAAAGAGTGCTGAATTTTTGCTGCACATGCTTAAAAATGCAGAGAGTAATGCTGAACTTAAGGGTTT
GGATGTAGACTCTCTGGTCATTGAACACATCCAGGTGAACAAGGCTCCTAAGATGCGCAGACGGACCTACAGAGCTCACG
GCCGGATTAACCCATACATGAGCTCCCCCTGCCACATCGAGATGATCCTCACTGAGAAGGAACAGATTGTTCCAAAGCCA
GAAGAGGAGGTTGCACAGAAGAAAAAGATATCCCAGAAGAAATTGAAGAAACAAAAGCTCATGGCACGGGAATAA

Library Parental gene expression (RPM)
SRP017611_liver 76 .72 RPM
SRP017611_kidney 127 .21 RPM
SRP017611_brain 93 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000022902 ortholog_one2one 5 retrogenes
retro_btau_164, retro_btau_221, retro_btau_4, retro_btau_50, retro_btau_75,
Choloepus hoffmanni ENSCHOG00000007872 possible_ortholog 50 retrogenes
retro_chof_1020, retro_chof_1021, retro_chof_107, retro_chof_1232, retro_chof_130, retro_chof_137, retro_chof_1405, retro_chof_1432, retro_chof_1448, retro_chof_1453, retro_chof_1471, retro_chof_1475, retro_chof_153, retro_chof_1634, retro_chof_1671, retro_chof_1678, retro_chof_1754, retro_chof_1786, retro_chof_187, retro_chof_1871, retro_chof_1895, retro_chof_1901, retro_chof_1908, retro_chof_2038, retro_chof_204, retro_chof_2133, retro_chof_2140, retro_chof_221, retro_chof_2243, retro_chof_2415, retro_chof_2458, retro_chof_246, retro_chof_2489, retro_chof_2534, retro_chof_2570, retro_chof_2610, retro_chof_2640, retro_chof_463, retro_chof_507, retro_chof_564, retro_chof_65, retro_chof_690, retro_chof_716, retro_chof_759, retro_chof_775, retro_chof_798, retro_chof_875, retro_chof_899, retro_chof_945, retro_chof_953,
Echinops telfairi ENSETEG00000011322 possible_ortholog 10 retrogenes
retro_etel_1787, retro_etel_1810, retro_etel_1900, retro_etel_1936, retro_etel_1954, retro_etel_207, retro_etel_396, retro_etel_470, retro_etel_565, retro_etel_831,
Homo sapiens ENSG00000215472 possible_ortholog 1 retrogene
retro_hsap_2367,
Latimeria chalumnae ENSLACG00000008835 ortholog_one2many 1 retrogene
retro_lcha_38,
Macropus eugenii ENSMEUG00000016709 possible_ortholog 26 retrogenes
retro_meug_1111, retro_meug_127, retro_meug_1285, retro_meug_1485, retro_meug_1821, retro_meug_188, retro_meug_1886, retro_meug_191, retro_meug_204, retro_meug_2159, retro_meug_2167, retro_meug_2183, retro_meug_257, retro_meug_326, retro_meug_355, retro_meug_373, retro_meug_410, retro_meug_413, retro_meug_509, retro_meug_58, retro_meug_703, retro_meug_738, retro_meug_740, retro_meug_779, retro_meug_81, retro_meug_934,
Microcebus murinus ENSMICG00000017102 possible_ortholog 14 retrogenes
retro_mmur_1046, retro_mmur_1047, retro_mmur_107, retro_mmur_1305, retro_mmur_1360, retro_mmur_1614, retro_mmur_195, retro_mmur_325, retro_mmur_335, retro_mmur_427, retro_mmur_484, retro_mmur_754, retro_mmur_817, retro_mmur_855,
Myotis lucifugus ENSMLUG00000025554 ortholog_one2many 22 retrogenes
retro_mluc_1141, retro_mluc_1224, retro_mluc_1300, retro_mluc_1375, retro_mluc_1468, retro_mluc_1500, retro_mluc_1547, retro_mluc_1579, retro_mluc_1739, retro_mluc_1755, retro_mluc_1822, retro_mluc_1870, retro_mluc_1959, retro_mluc_2018, retro_mluc_2027, retro_mluc_2036, retro_mluc_2059, retro_mluc_2165, retro_mluc_2198, retro_mluc_719, retro_mluc_835, retro_mluc_929,
Myotis lucifugus ENSMLUG00000029264 ortholog_one2many 36 retrogenes
retro_mluc_1043, retro_mluc_1060, retro_mluc_1061, retro_mluc_1081, retro_mluc_1094, retro_mluc_1163, retro_mluc_1193, retro_mluc_1206, retro_mluc_123, retro_mluc_1230, retro_mluc_1241, retro_mluc_1416, retro_mluc_157, retro_mluc_1581, retro_mluc_1652, retro_mluc_1677, retro_mluc_1693, retro_mluc_170, retro_mluc_1711, retro_mluc_1848, retro_mluc_1890, retro_mluc_2003, retro_mluc_2064, retro_mluc_2095, retro_mluc_2125, retro_mluc_2387, retro_mluc_2636, retro_mluc_2637, retro_mluc_661, retro_mluc_734, retro_mluc_763, retro_mluc_779, retro_mluc_785, retro_mluc_807, retro_mluc_938, retro_mluc_977,
Macaca mulatta ENSMMUG00000018837 possible_ortholog 26 retrogenes
retro_mmul_1015, retro_mmul_1046, retro_mmul_1205, retro_mmul_1216, retro_mmul_1225, retro_mmul_1441, retro_mmul_163, retro_mmul_172, retro_mmul_1784, retro_mmul_1858, retro_mmul_1952, retro_mmul_2006, retro_mmul_2008, retro_mmul_2257, retro_mmul_2268, retro_mmul_2284, retro_mmul_2304, retro_mmul_2512, retro_mmul_46, retro_mmul_474, retro_mmul_589, retro_mmul_652, retro_mmul_669, retro_mmul_825, retro_mmul_956, retro_mmul_971,
Monodelphis domestica ENSMODG00000003534 ortholog_one2one 11 retrogenes
retro_mdom_1153, retro_mdom_1194, retro_mdom_1437, retro_mdom_1734, retro_mdom_1783, retro_mdom_1980, retro_mdom_321, retro_mdom_337, retro_mdom_491, retro_mdom_541, retro_mdom_91,
Procavia capensis ENSPCAG00000003103 possible_ortholog 8 retrogenes
retro_pcap_193, retro_pcap_196, retro_pcap_197, retro_pcap_200, retro_pcap_206, retro_pcap_250, retro_pcap_363, retro_pcap_52,
Pongo abelii ENSPPYG00000009151 possible_ortholog 43 retrogenes
retro_pabe_1177, retro_pabe_1178, retro_pabe_1179, retro_pabe_1197, retro_pabe_1373, retro_pabe_1408, retro_pabe_1448, retro_pabe_1464, retro_pabe_1531, retro_pabe_1565, retro_pabe_1574, retro_pabe_1725, retro_pabe_1807, retro_pabe_1832, retro_pabe_1902, retro_pabe_2052, retro_pabe_2053, retro_pabe_2088, retro_pabe_2102, retro_pabe_2164, retro_pabe_2231, retro_pabe_2317, retro_pabe_2520, retro_pabe_2635, retro_pabe_2638, retro_pabe_2871, retro_pabe_2917, retro_pabe_2921, retro_pabe_2971, retro_pabe_3020, retro_pabe_3029, retro_pabe_3103, retro_pabe_3187, retro_pabe_3248, retro_pabe_3253, retro_pabe_3262, retro_pabe_3277, retro_pabe_347, retro_pabe_3493, retro_pabe_539, retro_pabe_567, retro_pabe_617, retro_pabe_882,
Pteropus vampyrus ENSPVAG00000001969 possible_ortholog 76 retrogenes
retro_pvam_1003, retro_pvam_1005, retro_pvam_1020, retro_pvam_1036, retro_pvam_1037, retro_pvam_104, retro_pvam_1042, retro_pvam_1085, retro_pvam_1093, retro_pvam_1105, retro_pvam_1155, retro_pvam_1162, retro_pvam_1186, retro_pvam_1194, retro_pvam_1204, retro_pvam_1218, retro_pvam_1279, retro_pvam_1336, retro_pvam_1338, retro_pvam_1351, retro_pvam_1366, retro_pvam_1372, retro_pvam_138, retro_pvam_1392, retro_pvam_1397, retro_pvam_1407, retro_pvam_1409, retro_pvam_142, retro_pvam_143, retro_pvam_1452, retro_pvam_1454, retro_pvam_182, retro_pvam_206, retro_pvam_220, retro_pvam_263, retro_pvam_268, retro_pvam_278, retro_pvam_292, retro_pvam_309, retro_pvam_339, retro_pvam_348, retro_pvam_395, retro_pvam_40, retro_pvam_402, retro_pvam_417, retro_pvam_424, retro_pvam_439, retro_pvam_442, retro_pvam_455, retro_pvam_464, retro_pvam_497, retro_pvam_520, retro_pvam_55, retro_pvam_571, retro_pvam_577, retro_pvam_584, retro_pvam_588, retro_pvam_596, retro_pvam_604, retro_pvam_608, retro_pvam_654, retro_pvam_659, retro_pvam_684, retro_pvam_700, retro_pvam_701, retro_pvam_705, retro_pvam_712, retro_pvam_716, retro_pvam_726, retro_pvam_751, retro_pvam_756, retro_pvam_777, retro_pvam_862, retro_pvam_88, retro_pvam_925, retro_pvam_966,
Sarcophilus harrisii ENSSHAG00000003060 possible_ortholog 14 retrogenes
retro_shar_206, retro_shar_214, retro_shar_279, retro_shar_387, retro_shar_457, retro_shar_586, retro_shar_593, retro_shar_606, retro_shar_713, retro_shar_743, retro_shar_751, retro_shar_800, retro_shar_802, retro_shar_817,
Tarsius syrichta ENSTSYG00000007402 possible_ortholog 20 retrogenes
retro_tsyr_1042, retro_tsyr_1298, retro_tsyr_1349, retro_tsyr_1416, retro_tsyr_1555, retro_tsyr_159, retro_tsyr_180, retro_tsyr_1801, retro_tsyr_1940, retro_tsyr_2021, retro_tsyr_2053, retro_tsyr_2088, retro_tsyr_253, retro_tsyr_304, retro_tsyr_693, retro_tsyr_752, retro_tsyr_77, retro_tsyr_819, retro_tsyr_860, retro_tsyr_868,
Tursiops truncatus ENSTTRG00000005797 possible_ortholog 31 retrogenes
retro_ttru_1153, retro_ttru_1338, retro_ttru_1374, retro_ttru_1436, retro_ttru_1509, retro_ttru_1716, retro_ttru_1757, retro_ttru_178, retro_ttru_1784, retro_ttru_1811, retro_ttru_1854, retro_ttru_1856, retro_ttru_193, retro_ttru_1932, retro_ttru_232, retro_ttru_264, retro_ttru_299, retro_ttru_447, retro_ttru_49, retro_ttru_568, retro_ttru_609, retro_ttru_627, retro_ttru_636, retro_ttru_660, retro_ttru_691, retro_ttru_703, retro_ttru_747, retro_ttru_800, retro_ttru_836, retro_ttru_884, retro_ttru_992,
Vicugna pacos ENSVPAG00000009568 possible_ortholog 1 retrogene
retro_vpac_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_218 96.97 71.74
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_242 82.05 84.78
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_rnor_419 88.49 75.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_rnor_441 97.83 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_rnor_554 82.02 95.65
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_rnor_613 78.19 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_rnor_667 54.55 65.22
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_rnor_738 95.68 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_rnor_762 91.73 71.74
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_rnor_774 86.36 94.57
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_rnor_803 79.61 55.43
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_rnor_815 82.18 93.48
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_rnor_837 92.47 100.00
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_rnor_877 77.69 65.22
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_rnor_932 63.83 50.54
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_rnor_934 80.30 71.20
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_rnor_972 88.52 98.37
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_rnor_982 93.91 61.96
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_rnor_1028 89.19 100.00
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_rnor_1146 72.92 76.63
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_rnor_1256 60.31 71.20
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_rnor_1281 56.30 72.28
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_rnor_1297 79.31 75.00
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_rnor_1419 78.23 66.85
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_rnor_1469 80.65 99.46
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_rnor_1470 80.65 99.46
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_rnor_1495 94.09 100.00
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_rnor_1504 91.89 100.00
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_rnor_1533 82.65 52.72
Please wait, loading
Please wait, loading
Please wait, loading
30. retro_rnor_1587 54.39 90.76
Please wait, loading
Please wait, loading
Please wait, loading
31. retro_rnor_1603 85.00 53.80
Please wait, loading
Please wait, loading
Please wait, loading
32. retro_rnor_1629 73.15 57.61
Please wait, loading
Please wait, loading
Please wait, loading
33. retro_rnor_1678 57.14 52.17
Please wait, loading
Please wait, loading
Please wait, loading
34. retro_rnor_1856 81.18 100.00
Please wait, loading
Please wait, loading
Please wait, loading
35. retro_rnor_1900 96.74 100.00
Please wait, loading
Please wait, loading
Please wait, loading
36. retro_rnor_1902 63.25 63.04
Please wait, loading
Please wait, loading
Please wait, loading
37. retro_rnor_1911 76.43 72.83
Please wait, loading
Please wait, loading
Please wait, loading
38. retro_rnor_1912 79.03 100.00
Please wait, loading
Please wait, loading
Please wait, loading
39. retro_rnor_1942 81.18 100.00
Please wait, loading
Please wait, loading
Please wait, loading
40. retro_rnor_1980 86.56 100.00
Please wait, loading
Please wait, loading
Please wait, loading
41. retro_rnor_2011 87.50 100.00
Please wait, loading
Please wait, loading
Please wait, loading
42. retro_rnor_2243 79.68 100.00
Please wait, loading
Please wait, loading
Please wait, loading
43. retro_rnor_2348 73.08 70.65
Please wait, loading
Please wait, loading
Please wait, loading
44. retro_rnor_2519 72.34 100.00
Please wait, loading
Please wait, loading
Please wait, loading
45. retro_rnor_2570 86.56 100.00
Please wait, loading
Please wait, loading
Please wait, loading
46. retro_rnor_2572 82.95 69.57
Please wait, loading
Please wait, loading
Please wait, loading
47. retro_rnor_2634 93.30 96.20
Please wait, loading
Please wait, loading
Please wait, loading
48. retro_rnor_2796 73.51 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000018680 retrocopies