Parental gene:

RGD1560220, ENSRNOG00000049819

Aliases:Dnajc19, RGD1560220
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:2:140149971..140174575(+)


>ENSRNOG00000049819
ATGGCCAGTACAGTGGTAGCAGTCGGATTGACCATTGCTGCTGCAGGATTTGCAGGCCGTTATGTTTTACAAGCCATGAA
GCATGTGGAGCCTCAAGTAAAACAAGTTTTTCAGAGTCTACCAAAATCTGCCTTCAGTGGTGGGTACTATAGAGGTGGGT
TTGAACCCAAAATGACAAAACGGGAAGCAGCATTAATACTAGGTGTAAGCCCTACTGCCAATAAAGGGAAGATCAGGGAT
GCTCATCGACGGATTATGCTCTTAAACCACCCAGACAAGGGCCCTCTGGTGGAAGAAGGTCTGAAACCCATACCAATCTG
TCGCAGCTGTTCATCGATCTGCAGGCGTTCCATTCTTAGTTGTTCCACTTCCTACAATCAAAACAAAGACTGTTTTATAC
ACTGTGTGTGTCTATGTGCATTCATGAATGCACCTATGGGTACACCTGTCAGACACTGTGAGACCCACTTGACCCATCTT
CCCCAGCCCACATCCTCTACAGGTTTGACATGTTTTGGACTAGAGCTAGAACTGTAG

Library Parental gene expression (RPM)
SRP017611_liver 19 .03 RPM
SRP017611_kidney 31 .05 RPM
SRP017611_brain 14 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000023513 possible_ortholog 1 retrogene
retro_btau_127,
Callithrix jacchus ENSCJAG00000012795 ortholog_one2many 10 retrogenes
retro_cjac_1008, retro_cjac_1192, retro_cjac_1364, retro_cjac_1430, retro_cjac_1550, retro_cjac_252, retro_cjac_2609, retro_cjac_2890, retro_cjac_3060, retro_cjac_914,
Cavia porcellus ENSCPOG00000021198 ortholog_one2one 1 retrogene
retro_cpor_126,
Dasypus novemcinctus ENSDNOG00000019067 possible_ortholog 1 retrogene
retro_dnov_49,
Erinaceus europaeus ENSEEUG00000006955 possible_ortholog 9 retrogenes
retro_eeur_221, retro_eeur_230, retro_eeur_309, retro_eeur_455, retro_eeur_48, retro_eeur_511, retro_eeur_596, retro_eeur_74, retro_eeur_94,
Echinops telfairi ENSETEG00000006897 possible_ortholog 7 retrogenes
retro_etel_1071, retro_etel_1222, retro_etel_1559, retro_etel_275, retro_etel_384, retro_etel_81, retro_etel_821,
Ficedula albicollis ENSFALG00000008296 ortholog_one2one 1 retrogene
retro_falb_28,
Gallus gallus ENSGALG00000008852 ortholog_one2one 1 retrogene
retro_ggal_17,
Loxodonta africana ENSLAFG00000001910 ortholog_one2one 5 retrogenes
retro_lafr_48, retro_lafr_515, retro_lafr_611, retro_lafr_881, retro_lafr_929,
Microcebus murinus ENSMICG00000010381 possible_ortholog 4 retrogenes
retro_mmur_1160, retro_mmur_225, retro_mmur_320, retro_mmur_728,
Myotis lucifugus ENSMLUG00000006865 possible_ortholog 1 retrogene
retro_mluc_84,
Mus musculus ENSMUSG00000027679 ortholog_one2one 3 retrogenes
retro_mmus_1446, retro_mmus_3071, retro_mmus_3554,
Otolemur garnettii ENSOGAG00000008754 possible_ortholog 11 retrogenes
retro_ogar_1214, retro_ogar_1334, retro_ogar_138, retro_ogar_1625, retro_ogar_1811, retro_ogar_2012, retro_ogar_2048, retro_ogar_2881, retro_ogar_301, retro_ogar_442, retro_ogar_718,
Ochotona princeps ENSOPRG00000009256 ortholog_one2one 5 retrogenes
retro_opri_1127, retro_opri_122, retro_opri_440, retro_opri_529, retro_opri_844,
Procavia capensis ENSPCAG00000014950 ortholog_one2one 2 retrogenes
retro_pcap_195, retro_pcap_25,
Pongo abelii ENSPPYG00000014328 possible_ortholog 2 retrogenes
retro_pabe_2126, retro_pabe_44,
Ictidomys tridecemlineatus ENSSTOG00000011508 ortholog_one2one 1 retrogene
retro_itri_552,
Tupaia belangeri ENSTBEG00000015089 possible_ortholog 27 retrogenes
retro_tbel_1126, retro_tbel_1166, retro_tbel_1167, retro_tbel_1296, retro_tbel_1301, retro_tbel_1491, retro_tbel_1693, retro_tbel_1780, retro_tbel_2117, retro_tbel_2136, retro_tbel_2267, retro_tbel_2459, retro_tbel_266, retro_tbel_2830, retro_tbel_3233, retro_tbel_3303, retro_tbel_3556, retro_tbel_3716, retro_tbel_3814, retro_tbel_384, retro_tbel_3849, retro_tbel_3963, retro_tbel_4043, retro_tbel_42, retro_tbel_633, retro_tbel_833, retro_tbel_889,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2913 59.14 52.25
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Download FASTA sequences of all ENSRNOG00000049819 retrocopies