Parental gene: | MEST, ENSTTRG00000004934 |
| Aliases: | None |
| Description: | mesoderm specific transcript [Source:HGNC Symbol;Acc:7028] |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | scaffold_87099:9876..18976(-) |
>ENSTTRG00000004934
ATGAGGGAGTGGTGGGTCCAGGTGGGGCTGTTGGCTGTGCCCCTGCTTGCAGCCTATCTGCACATCCCGCCCCCCCAGCT
TTCCCCTGCTCTTCACTCATGGAAGTCATCAGGCAAATTTTTTACCTACAAGGGACTGCGTATCTTCTACCAAGACTCTG
TGGGTGTGGTTGGAAGTCCAGAGATAGTTGTGCTTTTACACGGCTTTCCAACATCCAGCTATGACTGGTACAAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGCTTTGGCTTCAGTGACAAACCGAGACCACA
TCACTATTCCATATTCGAGCAGGCCAGCATTGTGGAAGCTCTTTTGCGGCATCTGGGGCTCCAGAACCGTAGGATCAACC
TGTTGTCTCACGACTATGGGGATATCGTTGCTCAGGAGCTGCTCTATAGGTTCAAGCAGAATCGATCTGGTCGGCTTACC
ATCAAGAGTCTCTGTCTGTCGAATGGAGGTATATTTCCTGAGACTCACCGTCCTCTCCTTCTCCAAAAGCTTCTCAAAGA
TGGAGGCATGCTGTCACCCATCCTCACGCGACTGATGAACTTCTTCGTATTCTCTCGAGGTCTCACCCCGGTCTTTGGGC
CATACACCCGACCCTCTGAGAGTGAACTGTGGGACATGTGGGCAGGGATACGCAACAATGACGGGAACTTGGTTATTGAC
AGTCTCTTGCAGTACATCAATCAAAGGAAGAAGTTTAGAAGACGCTGGGTGGGAGCTCTTGCCTCTGTATCTATTCCCAT
TCATTTTATCTATGGGCCACTGGATCCAGTGAATCCCTATCCAGAGTTTTTGGAGCTGTACAGGAAAACGCTGCCGCGGT
CCACAGTGTCGATTCTGGATGACCACATTAGCCACTATCCACAGCTAGAGGATCCCATGGGCTTCTTGAATGCATATATG
GGCTTCATCAACTCCTTCTGA
ATGAGGGAGTGGTGGGTCCAGGTGGGGCTGTTGGCTGTGCCCCTGCTTGCAGCCTATCTGCACATCCCGCCCCCCCAGCT
TTCCCCTGCTCTTCACTCATGGAAGTCATCAGGCAAATTTTTTACCTACAAGGGACTGCGTATCTTCTACCAAGACTCTG
TGGGTGTGGTTGGAAGTCCAGAGATAGTTGTGCTTTTACACGGCTTTCCAACATCCAGCTATGACTGGTACAAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGCTTTGGCTTCAGTGACAAACCGAGACCACA
TCACTATTCCATATTCGAGCAGGCCAGCATTGTGGAAGCTCTTTTGCGGCATCTGGGGCTCCAGAACCGTAGGATCAACC
TGTTGTCTCACGACTATGGGGATATCGTTGCTCAGGAGCTGCTCTATAGGTTCAAGCAGAATCGATCTGGTCGGCTTACC
ATCAAGAGTCTCTGTCTGTCGAATGGAGGTATATTTCCTGAGACTCACCGTCCTCTCCTTCTCCAAAAGCTTCTCAAAGA
TGGAGGCATGCTGTCACCCATCCTCACGCGACTGATGAACTTCTTCGTATTCTCTCGAGGTCTCACCCCGGTCTTTGGGC
CATACACCCGACCCTCTGAGAGTGAACTGTGGGACATGTGGGCAGGGATACGCAACAATGACGGGAACTTGGTTATTGAC
AGTCTCTTGCAGTACATCAATCAAAGGAAGAAGTTTAGAAGACGCTGGGTGGGAGCTCTTGCCTCTGTATCTATTCCCAT
TCATTTTATCTATGGGCCACTGGATCCAGTGAATCCCTATCCAGAGTTTTTGGAGCTGTACAGGAAAACGCTGCCGCGGT
CCACAGTGTCGATTCTGGATGACCACATTAGCCACTATCCACAGCTAGAGGATCCCATGGGCTTCTTGAATGCATATATG
GGCTTCATCAACTCCTTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005659 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000010760 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000022984 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000006066 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000008227 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006129 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009499 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012841 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009224 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018006 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000019698 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000000502 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000020977 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000008404 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_1026 | 77.78 | 68.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ttru_1115 | 86.53 | 90.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ttru_1133 | 85.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ttru_1907 | 86.07 | 74.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000004934 retrocopies