RetrogeneDB ID: | retro_amel_1463 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193427.1:186709..187042(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS16 | ||
Ensembl ID: | ENSAMEG00000008470 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60. % |
Parental protein coverage: | 68.1 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | VNGRPLEMIE-PRTLQYKLLEPVLLLGKERFAGVDIR-VRVKGGGHVAQIYAIRQSISKALVAYYQKYVD |
.NG.PLE..E....L..KLLEP.LLLGKE.F.G........K....VAQIY.I.Q.ISKAL.A.YQKY.D | |
Retrocopy | MNGQPLEVTE<AAKLRNKLLEPILLLGKEQFVGMNTK<ICMKVSRSVAQIYGICQPISKALMACYQKYLD |
Parental | EASKKEIKDILIQYDRL-LVADPRRCESKKFGGPGARA-RYQKSY |
EASK..IKDILIQYD...LVA.P..C.SK..GGP.A.A..YQKSY | |
Retrocopy | EASK*DIKDILIQYDQTSLVAHPHHCKSKMLGGPDACA<SYQKSY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |