Parental gene: | RPS16, ENSAMEG00000008470 |
| Aliases: | None |
| Description: | None |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL193591.1:139984..142540(+) |
>ENSAMEG00000008470
CCTTTTCCGGTTGCGGCGCCGCGCGGTGAGGGCCTCTTACCTACGTTCGCAGTCATGCCGTCCAAGGGCCCTCTGCAGTC
CGTGCAGGTCTTCGGACGCAAGAAGACGGCCACAGCCGTGGCGCACTGCAAACGGGGCAACGGCCTCATCAAGGTGAATG
GGCGGCCCCTGGAGATGATCGAGCCGCGCACGCTGCAATACAAGCTACTGGAACCTGTTCTGCTTCTGGGCAAGGAGCGA
TTTGCTGGGGTGGACATCCGAGTCCGAGTGAAGGGTGGTGGTCACGTGGCCCAGATTTACGCAATCCGCCAGTCCATCTC
CAAAGCCCTGGTGGCCTATTACCAGAAATATGTGGATGAGGCTTCCAAGAAGGAGATCAAAGACATCCTCATCCAGTATG
ACCGACTGCTGGTAGCTGATCCCCGGCGCTGCGAATCCAAAAAGTTTGGCGGTCCTGGTGCCCGTGCTCGCTACCAGAAA
TCCTACCGATAA
CCTTTTCCGGTTGCGGCGCCGCGCGGTGAGGGCCTCTTACCTACGTTCGCAGTCATGCCGTCCAAGGGCCCTCTGCAGTC
CGTGCAGGTCTTCGGACGCAAGAAGACGGCCACAGCCGTGGCGCACTGCAAACGGGGCAACGGCCTCATCAAGGTGAATG
GGCGGCCCCTGGAGATGATCGAGCCGCGCACGCTGCAATACAAGCTACTGGAACCTGTTCTGCTTCTGGGCAAGGAGCGA
TTTGCTGGGGTGGACATCCGAGTCCGAGTGAAGGGTGGTGGTCACGTGGCCCAGATTTACGCAATCCGCCAGTCCATCTC
CAAAGCCCTGGTGGCCTATTACCAGAAATATGTGGATGAGGCTTCCAAGAAGGAGATCAAAGACATCCTCATCCAGTATG
ACCGACTGCTGGTAGCTGATCCCCGGCGCTGCGAATCCAAAAAGTTTGGCGGTCCTGGTGCCCGTGCTCGCTACCAGAAA
TCCTACCGATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014176 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000021093 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014170 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000011359 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000010743 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000105193 | ortholog_one2one | 11 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014414 | possible_ortholog | 10 retrogenes | |
| Loxodonta africana | ENSLAFG00000001541 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000029089 | ortholog_one2one | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000019370 | ortholog_one2many | 8 retrogenes | |
| Monodelphis domestica | ENSMODG00000013545 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000037563 | ortholog_one2one | 11 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014388 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004497 | possible_ortholog | 4 retrogenes | |
| Oreochromis niloticus | ENSONIG00000000006 | ortholog_one2one | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000016930 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019578 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000010712 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_306 | 86.54 | 95.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_668 | 57.23 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_amel_840 | 67.05 | 53.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_amel_1105 | 60.61 | 60.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_amel_1143 | 68.24 | 50.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_amel_1463 | 60.00 | 68.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_amel_1790 | 68.90 | 98.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_amel_1865 | 66.26 | 98.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000008470 retrocopies