RetrogeneDB ID: | retro_amel_1105 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192908.1:254961..255254(+) | ||
Located in intron of: | ENSAMEG00000009971 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS16 | ||
Ensembl ID: | ENSAMEG00000008470 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.61 % |
Parental protein coverage: | 60.12 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | PVAAPRGEGLLPTFAVMPSKGPLQSVQVFGRKKTATAVAHCKRGNGLIK-VNGRPLEMIEPRTLQYKLLE |
P..A...E.LLP....M.S...LQ.VQVFG..K..TA.AHCK.GN.LI..VNG..LEMI.P.TLQYKLL. | |
Retrocopy | PLVAACDEDLLPVPTAMQSTDSLQLVQVFGGRKVVTAMAHCKWGNRLIR<VNG*SLEMIQPCTLQYKLLK |
Parental | PVLLLGKERFAGVDIRVRVKGGGHVAQIY |
PVLLLGK...AG.D..V..KGGGH.AQI. | |
Retrocopy | PVLLLGKR*LAGMDTSVCTKGGGHMAQIH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |