Parental gene: | Rps16, ENSMUSG00000037563 |
| Aliases: | Rps16, AA420385, AI317031 |
| Description: | ribosomal protein S16 [Source:MGI Symbol;Acc:MGI:98118] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 7:28350651..28352696(+) |
>ENSMUSG00000037563
ATGCCGTCCAAGGGTCCGCTGCAGTCCGTGCAGGTCTTCGGACGCAAGAAAACAGCCACGGCTGTGGCCCACTGCAAACG
GGGAAATGGGCTCATCAAGGTGAACGGACGTCCCCTGGAGATGATCGAGCCGCGCACGCTGCAGTACAAGTTACTGGAGC
CTGTTTTGCTTCTGGGCAAGGAGCGATTTGCTGGTGTGGATATTCGGGTCCGTGTGAAGGGTGGTGGACATGTGGCCCAA
ATTTATGCCATCCGACAGTCCATCTCAAAGGCCCTGGTAGCTTATTACCAAAAATATGTGGATGAAGCCTCCAAGAAGGA
GATCAAAGATATCCTCATCCAATACGATCGGACCCTGCTTGTAGCTGACCCCCGTCGCTGCGAATCCAAAAAGTTTGGAG
GTCCTGGTGCCCGTGCCCGATACCAGAAATCCTACCGATAA
ATGCCGTCCAAGGGTCCGCTGCAGTCCGTGCAGGTCTTCGGACGCAAGAAAACAGCCACGGCTGTGGCCCACTGCAAACG
GGGAAATGGGCTCATCAAGGTGAACGGACGTCCCCTGGAGATGATCGAGCCGCGCACGCTGCAGTACAAGTTACTGGAGC
CTGTTTTGCTTCTGGGCAAGGAGCGATTTGCTGGTGTGGATATTCGGGTCCGTGTGAAGGGTGGTGGACATGTGGCCCAA
ATTTATGCCATCCGACAGTCCATCTCAAAGGCCCTGGTAGCTTATTACCAAAAATATGTGGATGAAGCCTCCAAGAAGGA
GATCAAAGATATCCTCATCCAATACGATCGGACCCTGCTTGTAGCTGACCCCCGTCGCTGCGAATCCAAAAAGTTTGGAG
GTCCTGGTGCCCGTGCCCGATACCAGAAATCCTACCGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 27 .17 RPM |
| SRP007412_cerebellum | 26 .83 RPM |
| SRP007412_heart | 63 .01 RPM |
| SRP007412_kidney | 70 .40 RPM |
| SRP007412_liver | 66 .99 RPM |
| SRP007412_testis | 33 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014176 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000008470 | ortholog_one2one | 8 retrogenes | |
| Bos taurus | ENSBTAG00000021093 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014170 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000011359 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000010743 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000105193 | ortholog_one2one | 11 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014414 | possible_ortholog | 10 retrogenes | |
| Loxodonta africana | ENSLAFG00000001541 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000029089 | ortholog_one2one | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000019370 | ortholog_one2many | 8 retrogenes | |
| Monodelphis domestica | ENSMODG00000013545 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000017722 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014388 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004497 | possible_ortholog | 4 retrogenes | |
| Oreochromis niloticus | ENSONIG00000000006 | ortholog_one2one | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000016930 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019578 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000010712 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000020817 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_700 | 63.03 | 79.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_771 | 89.04 | 99.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1780 | 93.55 | 84.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_2058 | 69.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_2125 | 90.00 | 68.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_2697 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_2727 | 89.13 | 63.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_3091 | 82.88 | 98.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmus_3173 | 87.50 | 98.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmus_3198 | 100.00 | 68.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmus_3202 | 53.33 | 60.27 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000037563 retrocopies