RetrogeneDB ID: | retro_amel_258 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192368.1:3289710..3290213(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000018099 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHB | ||
Ensembl ID: | ENSAMEG00000012364 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.9 % |
Parental protein coverage: | 61.99 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PRIFTSIGDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLT |
P......GDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLT | |
Retrocopy | PHLHQHRGDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLT |
Parental | FGKEFTE-AVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEA |
FGKEFTE.AVEAKQVAQQEAE.ARFVVEKAEQQKKAAIISAEGD.KAA.LIANSLATAGDGL.ELRKLEA | |
Retrocopy | FGKEFTE<AVEAKQVAQQEAETARFVVEKAEQQKKAAIISAEGDTKAAKLIANSLATAGDGLTELRKLEA |
Parental | AEDIAYQLSRSRNITYLPAGQSVLLQLPQ |
AEDIAYQLS.SRNITYLPAGQSVLLQLPQ | |
Retrocopy | AEDIAYQLSHSRNITYLPAGQSVLLQLPQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |