RetrogeneDB ID: | retro_chof_1665 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_3538:31742..32094(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | IMMP1L | ||
Ensembl ID: | ENSCHOG00000010106 | ||
Aliases: | None | ||
Description: | IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:HGNC Symbol;Acc:26317] |
Percent Identity: | 69.17 % |
Parental protein coverage: | 71.08 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | IQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRVI |
..Y.....CAFEYVGG.V.CS.PS.EPTIQN.DI.FAENLS.HFYGIQR.D.V.AKSP.D.K.NICK.VI | |
Retrocopy | LYYSV*LYCAFEYVGGGVLCSRPSREPTIQN*DIGFAENLSQHFYGIQRTDTVVAKSPCDSKANICKTVI |
Parental | GLEGDKILTNS-SLDFFK-SHSYVPMGHVWLEGDNLQNSTDSRCYGPIPY |
GLEG.KI.TNS.S..F.K...S.V..GHV.LEGDNLQNST.SRC.GPI.Y | |
Retrocopy | GLEGGKIFTNS<SIRFLK<IKSHVSVGHVCLEGDNLQNSTNSRCNGPILY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |