RetrogeneDB ID: | retro_dord_176 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_4561:89605..90027(+) | ||
Located in intron of: | ENSDORG00000001030 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000009005 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55.24 % |
Parental protein coverage: | 83.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SIGKPAPDFTATAVVDGAFTEVKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSEHAEDFRKLGCEVLGVS |
.....AP.F..TAVV.G.F.E..L.D..GKY.VLFFYPLDF..VCPT.I.AFS..A..F....CEV..V. | |
Retrocopy | AVTQHAPYFKGTAVVNGEFKELSLDDFKGKYLVLFFYPLDFISVCPTDIVAFSDKANEFHDVNCEVITVL |
Parental | VDSQFTHLAWINTPRKEGGL-GPLNIPLLADVTRSLSLNYGVLKKDEGIAYRGLFIIDGKGVLRQITVND |
VDS.F.HLAW.NTPRK.GGL.GP.....L.......S..YGVL....G.A.RGLFIID..GV.....VND | |
Retrocopy | VDSHFSHLAWVNTPRKNGGL<GPREHHTLVGFNQ-ISRDYGVLLEGPGLALRGLFIIDPNGVIKHLRVND |
Parental | LPV |
LPV | |
Retrocopy | LPV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |