RetrogeneDB ID: | retro_dord_442 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_18948:11610..12020(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Ywhab | ||
Ensembl ID: | ENSDORG00000001064 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917] |
Percent Identity: | 60.14 % |
Parental protein coverage: | 76.54 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | IEQKERNEKKQQMGKEYREKIEAELQDICNDVLEL-LDKYLIPNATQPESKVFYLKMKGDYFRYLSEVAS |
.........K.....E....IE..L.DICND.L.L.L.K.LIPNA.Q.ESKVFYLKMK.D......EVA. | |
Retrocopy | LSERQKVLRKISRSCENTGRIENKLRDICNDILSL<LGKFLIPNAPQAESKVFYLKMKKDCYHIMAEVAA |
Parental | GDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAE |
GD.K...V..S.QAYQE.FEISKKE.QP.HPIRL.LALN.SVFYYEILNSPE....L.KTAFDE.IA. | |
Retrocopy | GDDKKGIVNQSLQAYQEVFEISKKEIQPMHPIRLCLALNLSVFYYEILNSPEENSFLEKTAFDEVIAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |