RetrogeneDB ID: | retro_etel_1221 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_230834:23472..23989(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000017085 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSETEG00000009967 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 57.3 % |
Parental protein coverage: | 70.33 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | VTEQGHELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREK-IEAELQDICND |
VTEQ..ELSNEERNLLSVA..NV.VG..RSSWRV.SSIEQ...R.EKK.....E.REK..E..L..ICND | |
Retrocopy | VTEQRAELSNEERNLLSVA*ENV<VGIHRSSWRVVSSIEQNMDRAEKKDSK*LENREK>SETKLRAICND |
Parental | VLELLDKYLILNAT-QPESKVFYLKMKGDYFRYLSEVASGDN-KQTTVSNSQQAYQEAFEISKKEMQPTH |
.L.LL.K.LILNA..Q.E...........Y.......A..D..K......SQ.AYQE.....KK.MQ.TH | |
Retrocopy | ALCLLVKVLILNASRQRENSLYLKMKGDYYHYLTEVTAEKDA<KKRMADFSQEAYQETPGSNKKVMQ-TH |
Parental | PIRLGLALNFSVFYYEILNSPEKACSLAKTA-FDEAIA |
P..LGLA..FSVFYYEILNS.EKACSLAKTA.FD.A.. | |
Retrocopy | PGGLGLAGSFSVFYYEILNSSEKACSLAKTA<FDKAFS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |