RetrogeneDB ID: | retro_chof_487 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_113676:6026..6752(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSCHOG00000005782 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 86.36 % |
Parental protein coverage: | 98.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNKERNLLSVSYKNVVGARRSSWRVISSIEQKTE |
MDK.ELVQKAKLAEQAERYDDMAA.MK.VTEQG.ELSN.ERNLLSV.YKNVVGARRSSWRV.SSIEQKTE | |
Retrocopy | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
Parental | RNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDSKQT |
..EKKQQM..EYREKIE.EL.DICNDVL.LL.K.LIPNA.Q.ESKVFYLKMKGDY.RYL.EVA.GD.K.. | |
Retrocopy | GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDGKKG |
Parental | TVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEES |
.V..SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTL.EES | |
Retrocopy | IVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEES |
Parental | YKDSTLIMQLLRDNLTXXTSETQGDEREAGGG |
YKDSTLIMQLLRDNLT..TS.TQGDE.EAG.G | |
Retrocopy | YKDSTLIMQLLRDNLTLWTSDTQGDETEAGEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |