RetrogeneDB ID: | retro_etel_1705 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_288434:5691..6129(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSETEG00000009967 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 79.45 % |
Parental protein coverage: | 59.35 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VLELLDKYLILNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPI |
VL....K.L..NA.Q.ES.VFYLKMKGDY.RYL.EVA.GD.K...V..SQ.AYQEAFEISKKEMQPT.PI | |
Retrocopy | VLDFDKKFLVPNASQAESQVFYLKMKGDYYRYLAEVAAGDDKKGIVDPSQLAYQEAFEISKKEMQPTYPI |
Parental | RLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE |
RLGLAL.FSVFYYEILNS.EKACSLAKTA.DEAIAELDT..EESYKDSTLI.QLLRDNLTLWTS..QGDE | |
Retrocopy | RLGLALKFSVFYYEILNSQEKACSLAKTALDEAIAELDT*SEESYKDSTLIVQLLRDNLTLWTSDTQGDE |
Parental | ADAGEG |
A.AGEG | |
Retrocopy | AEAGEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |