RetrogeneDB ID: | retro_etel_189 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3246:348771..349362(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000008329 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.09 % |
Parental protein coverage: | 53.89 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | DKVQAMYIWIDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNSDMYLIPVAMFRDPFRRDP |
.KVQAMYIWIDGTGEGL.CKT.TLD.EPK.V.EL..WNFDG.STFQSEGSNSDMYLIPVAMF.DPFRRDP | |
Retrocopy | EKVQAMYIWIDGTGEGLPCKT*TLDLEPKSVGELSKWNFDGCSTFQSEGSNSDMYLIPVAMFWDPFRRDP |
Parental | NKLVFCEVFKYNRKPAETNLRHTCKRIMDMVTSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYC |
NKLVFCEVFKYN.KPAETNLRH.CKRIMDMV.SQH.WFGM.......GTD..PFGWPSNGF.GPQ.PYYC | |
Retrocopy | NKLVFCEVFKYN*KPAETNLRHICKRIMDMVSSQHSWFGMDAK----GTDEYPFGWPSNGFSGPQDPYYC |
Parental | GVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFI |
.VGA.KAY.RDI.EA.Y.AC.YAGIKIG.TN..VMPAQWEFQIGPCEGIDMGDHLW...FI | |
Retrocopy | SVGAEKAYSRDIMEAPYQACWYAGIKIGRTNVKVMPAQWEFQIGPCEGIDMGDHLWLDHFI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |