Parental gene:

GLUL, ENSSSCG00000015545

Aliases:None
Description:Sus scrofa glutamate-ammonia ligase (GLUL), mRNA. [Source:RefSeq mRNA;Acc:NM_213909]
Organism:Pig (Sus scrofa)
Coordinates:9:135908576..135968462(-)


>ENSSSCG00000015545
ATGGCCACCTCAGCGAGCTCCCACTTGAACAAAGGCATCAAGCAGGTGTACATGTCCCTGCCCCAGGGCGAGAAAGTCCA
AGCTATGTACATCTGGATTGACGGTACGGGAGAGGGACTGCGCTGCAAGACCCGGACCCTGGATTCTGAGCCCAAGTGTA
TAGAAGAGTTGCCCGAGTGGAATTTCGATGGCTCTAGTACTTTTCAGTCTGAAGGCTCCAACAGTGACATGTATCTTGTC
CCTGCTGCCATGTTTCGGGACCCTTTCCGCAAGGACCCCAACAAGCTGGTGTTCTGTGAGGTCTTCAAGTACAACCGAAA
GCCTGCAGAGACCAACTTAAGGCACACCTGTAAACGGATAATGGACATGGTGAGCAACCAGCACCCCTGGTTTGGAATGG
AGCAGGAATATACTCTCATGGGCACAGATGGACACCCCTTTGGTTGGCCTTCCAATGGCTTCCCTGGGCCCCAAGGTCCG
TACTATTGTGGTGTTGGAGCAGACAAAGCCTATGGCAGGGACATTGTGGAGGCTCACTACCGGGCCTGCTTGTATGCCGG
CATCAAGATTGGGGGCACCAATGCCGAGGTCATGCCCGCCCAGTGGGAATTCCAGATCGGACCCTGTGAAGGAATCGACA
TGGGAGATCACCTCTGGGTGGCCCGATTCATCTTGCATCGTGTGTGCGAAGACTTCGGAGTGATCGCCACCTTTGATCCT
AAGCCCATTCCTGGGAACTGGAATGGTGCCGGCTGCCACACCAACTTTAGCACCAAGGCCATGCGAGAGGAGAATGGTCT
GAAGTACATCGAGGAGGCCATCGAGAAGCTAAGCAAGCGGCACCAGTACCACATCCGAGCCTACGATCCCAAGGGGGGCC
TGGACAACGCCCGGCGCCTAACTGGATTCCATGAAACCTCCAACATCAACGACTTTTCTGCCGGCGTGGCCAACCGTGGC
GCTAGCATCCGCATTCCCCGGACTGTCGGCCAGGAGAAGAAGGGTTACTTCGAAGACCGTCGCCCTTCTGCCAACTGTGA
CCCCTTTGCGGTGACAGAAGCTCTCATCCGCACGTGTCTCCTCAACGAAACTGGCGACGAGCCCTTCCAGTACAAAAACT
AA

Library Parental gene expression (RPM)
SRP014902_placenta 169 .50 RPM
SRP014902_testis 152 .76 RPM
SRP018856_adipose 362 .14 RPM
SRP018288_kidney 125 .99 RPM
SRP018288_lung 784 .37 RPM
SRP018288_liver 165 .19 RPM
SRP018288_heart 179 .19 RPM
SRP035408_liver 28 .48 RPM
SRP035408_brain 312 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013631 ortholog_one2one 4 retrogenes
retro_btau_1050, retro_btau_1474, retro_btau_336, retro_btau_824,
Canis familiaris ENSCAFG00000013102 ortholog_one2many 2 retrogenes
retro_cfam_1691, retro_cfam_2143,
Callithrix jacchus ENSCJAG00000004654 ortholog_one2many 1 retrogene
retro_cjac_2837,
Dasypus novemcinctus ENSDNOG00000013948 ortholog_one2one 4 retrogenes
retro_dnov_1386, retro_dnov_1870, retro_dnov_2393, retro_dnov_842,
Equus caballus ENSECAG00000015865 ortholog_one2one 1 retrogene
retro_ecab_979,
Echinops telfairi ENSETEG00000008329 ortholog_one2many 3 retrogenes
retro_etel_143, retro_etel_189, retro_etel_1968,
Felis catus ENSFCAG00000010551 ortholog_one2one 1 retrogene
retro_fcat_1811,
Homo sapiens ENSG00000135821 ortholog_one2one 4 retrogenes
retro_hsap_2364, retro_hsap_3255, retro_hsap_848, retro_hsap_935,
Gorilla gorilla ENSGGOG00000024712 ortholog_one2many 3 retrogenes
retro_ggor_1794, retro_ggor_2216, retro_ggor_754,
Loxodonta africana ENSLAFG00000000700 ortholog_one2one 1 retrogene
retro_lafr_196,
Macropus eugenii ENSMEUG00000001774 ortholog_one2one 6 retrogenes
retro_meug_1013, retro_meug_1394, retro_meug_1561, retro_meug_409, retro_meug_433, retro_meug_746,
Macaca mulatta ENSMMUG00000022884 ortholog_one2one 2 retrogenes
retro_mmul_2047, retro_mmul_954,
Monodelphis domestica ENSMODG00000006787 ortholog_one2one 4 retrogenes
retro_mdom_1268, retro_mdom_488, retro_mdom_823, retro_mdom_892,
Mus musculus ENSMUSG00000026473 ortholog_one2one 3 retrogenes
retro_mmus_1730, retro_mmus_1767, retro_mmus_696,
Nomascus leucogenys ENSNLEG00000018007 ortholog_one2one 3 retrogenes
retro_nleu_1388, retro_nleu_293, retro_nleu_416,
Pongo abelii ENSPPYG00000000440 ortholog_one2one 1 retrogene
retro_pabe_2698,
Pan troglodytes ENSPTRG00000001751 ortholog_one2one 4 retrogenes
retro_ptro_2201, retro_ptro_2823, retro_ptro_589, retro_ptro_647,
Sarcophilus harrisii ENSSHAG00000000116 ortholog_one2many 1 retrogene
retro_shar_553,
Ictidomys tridecemlineatus ENSSTOG00000014529 ortholog_one2one 2 retrogenes
retro_itri_1083, retro_itri_743,
Tupaia belangeri ENSTBEG00000003522 ortholog_one2one 3 retrogenes
retro_tbel_2230, retro_tbel_3079, retro_tbel_3992,
Tarsius syrichta ENSTSYG00000002066 ortholog_one2one 1 retrogene
retro_tsyr_385,
Tursiops truncatus ENSTTRG00000010781 ortholog_one2one 1 retrogene
retro_ttru_543,
Drosophila melanogaster FBgn0001145 ortholog_one2many 1 retrogene
retro_dmel_44,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_726 97.97 79.36
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Download FASTA sequences of all ENSSSCG00000015545 retrocopies