RetrogeneDB ID: | retro_tsyr_385 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_10741:4406..5165(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GLUL | ||
Ensembl ID: | ENSTSYG00000002066 | ||
Aliases: | None | ||
Description: | glutamate-ammonia ligase [Source:HGNC Symbol;Acc:4341] |
Percent Identity: | 90.91 % |
Parental protein coverage: | 67.83 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNG |
MFRDPF.KDPNKL.F.EVFKYNRKPAETNLRHT.KRIMDMVSN..PWF.MEQEYTLMGTDGHPFG.PS.G | |
Retrocopy | MFRDPFSKDPNKLMFYEVFKYNRKPAETNLRHTSKRIMDMVSNKQPWFRMEQEYTLMGTDGHPFG*PSKG |
Parental | FPGPQGPYYCGVGADKAYGRDIVESHYRACLYAGVKIVGTNAEVMPAQWEFQIGPCEGISMGDHLWVARF |
FPGPQGPYYCGV.ADKAYGRDIVESHYRACL.AGVKIVGTNA.VMPAQWEFQI..CEGISMGDHLWVARF | |
Retrocopy | FPGPQGPYYCGVAADKAYGRDIVESHYRACLCAGVKIVGTNAKVMPAQWEFQIRTCEGISMGDHLWVARF |
Parental | ILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGG |
ILHRVCEDFGVIATFDPK.IPGNWNGAGCHTNFSTK.MREENGLKYIEEAIEKLSK.HQYHIRAYDPKGG | |
Retrocopy | ILHRVCEDFGVIATFDPKSIPGNWNGAGCHTNFSTKTMREENGLKYIEEAIEKLSKQHQYHIRAYDPKGG |
Parental | LDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGY |
.D.AR.LTGFHE.SNINDFSAGVAN.SASIR.PRTVGQEKKGY | |
Retrocopy | RDSARCLTGFHEISNINDFSAGVANHSASIRVPRTVGQEKKGY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |