RetrogeneDB ID: | retro_ttru_543 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2636:330909..331852(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GLUL | ||
Ensembl ID: | ENSTTRG00000010781 | ||
Aliases: | None | ||
Description: | glutamate-ammonia ligase [Source:HGNC Symbol;Acc:4341] |
Percent Identity: | 75.23 % |
Parental protein coverage: | 85.52 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | IEELPEWNFDGSSTFQSEG-SNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMD |
..ELPEW.FDGSSTFQSE..SNSD.YL..AAMF.D.F.KDP.KLVFCEVFKYNRKP.ETN.RHTCK...D | |
Retrocopy | LDELPEWHFDGSSTFQSEA<SNSDKYLTLAAMFQDLFCKDP-KLVFCEVFKYNRKPTETN*RHTCKWVTD |
Parental | MVSNQRPWFGMEQEYTLMGTDGHPFGWPSNGFPGP-QGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIG |
MVSNQ.P.FGMEQEY.LMGTD.HPFGWPS..FPGP.Q.PY.CGVG.DKA.GRDIV.A...AC.Y...KI. | |
Retrocopy | MVSNQHPRFGMEQEYILMGTDEHPFGWPSSHFPGP<QCPYDCGVGEDKACGRDIVQAYHQACSYTCVKIS |
Parental | GT-NAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKA |
GT.NAEV.PA.WEFQIGPCEG.DM..H.WVARFIL..V.EDFG..ATFDPKPIPG.WNGAGCHTNF.TKA | |
Retrocopy | GT>NAEVIPAWWEFQIGPCEGMDMRHHFWVARFILWHVFEDFGMTATFDPKPIPGTWNGAGCHTNFITKA |
Parental | MREENGLKY-IEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTV |
MRE.NGLK...EEAIEKLS...QY.I.AYDPKG.LDNAR.LT..HETSN.NDFSAGVAN.GASI.IPRTV | |
Retrocopy | MREDNGLKH<LEEAIEKLSE--QYCI*AYDPKGDLDNARHLTRLHETSNFNDFSAGVANPGASIHIPRTV |
Parental | GQEKKGYFEDRRPSANCDPFAVTEALIRTCLLNETGDEPFQYK |
GQ.KKGY.E....S.NCDPF.VTEALI.TCLLN.TG..P.QYK | |
Retrocopy | GQ-KKGYWEYHHSSVNCDPFSVTEALICTCLLNGTGNGPIQYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |