Parental gene:

ENSSHAG00000000116

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL860780.1:20..2801(-)


>ENSSHAG00000000116
ATGGAGCAAGAGTATACTCTCATGGGAACAGATGGACACCCTTTTGGTTGGCCTTCCAATGGATTCCCTGGACCCCAGGG
TCCATATTACTGTGGCGTGGGAGCTGATAAAGCCTATGGAAGAGATATAGCGGAAGCTCATTACCGTGCTTGCCTATATG
CTGGAGTCAAAATTGGGGGGACAAATGCTGAAGTAATGCCAGCTCAGTGGGAGTTCCAGATAGGACCGTGTGAAGGGATT
GAAATGGGAGATCACCTCTGGATTTCCCGCTTCATCCTCCATCGAGTGTGTGAAGATTTTGGAATGATCGTAACATTTGA
TCCCAAGCCCATCCCTGGAAACTGGAATGGAGCTGGTTGCCATACTAACTTCAGTACCAAGGCCATGAGAGAAGAGAATG
GTCTAAAGTTTATTGAAGAAGCCATCGAGAGATTAAGTAAACGACACAAGTATCACATCCGAGCCTATGACCCCAAAGGG
GGTCTGGACAATGCCCGTCGCCTGACAGGTTTCAATGAGACATCCAACATCAACGAGTTCTCTGCTGGTGTGGCCAACCG
CGGCGCCAGCATCCGAATTCCCAGGATGGTTGGGCAGGACAAGAAGGGCTACTTTGAAGATCGCCGCCCCTCTGCCAACT
GTGACCCTTACGCAGTGACAGAGGCGCTTATCCGTACCTGTCTCCTC

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013631 ortholog_one2many 4 retrogenes
retro_btau_1050, retro_btau_1474, retro_btau_336, retro_btau_824,
Canis familiaris ENSCAFG00000013102 ortholog_many2many 2 retrogenes
retro_cfam_1691, retro_cfam_2143,
Callithrix jacchus ENSCJAG00000004654 ortholog_many2many 1 retrogene
retro_cjac_2837,
Dasypus novemcinctus ENSDNOG00000013948 ortholog_one2many 4 retrogenes
retro_dnov_1386, retro_dnov_1870, retro_dnov_2393, retro_dnov_842,
Equus caballus ENSECAG00000015865 ortholog_one2many 1 retrogene
retro_ecab_979,
Echinops telfairi ENSETEG00000008329 ortholog_many2many 3 retrogenes
retro_etel_143, retro_etel_189, retro_etel_1968,
Felis catus ENSFCAG00000010551 ortholog_one2many 1 retrogene
retro_fcat_1811,
Homo sapiens ENSG00000135821 ortholog_one2many 4 retrogenes
retro_hsap_2364, retro_hsap_3255, retro_hsap_848, retro_hsap_935,
Gorilla gorilla ENSGGOG00000024712 ortholog_many2many 3 retrogenes
retro_ggor_1794, retro_ggor_2216, retro_ggor_754,
Loxodonta africana ENSLAFG00000000700 ortholog_one2many 1 retrogene
retro_lafr_196,
Macaca mulatta ENSMMUG00000022884 ortholog_one2many 2 retrogenes
retro_mmul_2047, retro_mmul_954,
Monodelphis domestica ENSMODG00000006787 ortholog_one2many 4 retrogenes
retro_mdom_1268, retro_mdom_488, retro_mdom_823, retro_mdom_892,
Mus musculus ENSMUSG00000026473 ortholog_one2many 3 retrogenes
retro_mmus_1730, retro_mmus_1767, retro_mmus_696,
Nomascus leucogenys ENSNLEG00000018007 ortholog_one2many 3 retrogenes
retro_nleu_1388, retro_nleu_293, retro_nleu_416,
Pongo abelii ENSPPYG00000000440 ortholog_one2many 1 retrogene
retro_pabe_2698,
Pan troglodytes ENSPTRG00000001751 ortholog_one2many 4 retrogenes
retro_ptro_2201, retro_ptro_2823, retro_ptro_589, retro_ptro_647,
Sus scrofa ENSSSCG00000015545 ortholog_one2many 1 retrogene
retro_sscr_726,
Ictidomys tridecemlineatus ENSSTOG00000014529 ortholog_one2many 2 retrogenes
retro_itri_1083, retro_itri_743,
Tupaia belangeri ENSTBEG00000003522 ortholog_one2many 3 retrogenes
retro_tbel_2230, retro_tbel_3079, retro_tbel_3992,
Tarsius syrichta ENSTSYG00000002066 ortholog_one2many 1 retrogene
retro_tsyr_385,
Tursiops truncatus ENSTTRG00000010781 ortholog_one2many 1 retrogene
retro_ttru_543,
Drosophila melanogaster FBgn0001145 ortholog_many2many 1 retrogene
retro_dmel_44,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_553 81.38 82.10
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Download FASTA sequences of all ENSSHAG00000000116 retrocopies