RetrogeneDB ID: | retro_tbel_3992 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_49914:201..773(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GLUL | ||
Ensembl ID: | ENSTBEG00000003522 | ||
Aliases: | None | ||
Description: | glutamate-ammonia ligase [Source:HGNC Symbol;Acc:4341] |
Percent Identity: | 73.44 % |
Parental protein coverage: | 51.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNSDMYLIPAAMF-RDPFRKDPNKLVFCEVIKY |
TG.GL.CKTRTLDCE.KCV.ELPEWNFDGSSTFQSEGSNSDMYL.PA.MF..DPF.KDPNKLV.CE.IKY | |
Retrocopy | TGKGLCCKTRTLDCELKCVKELPEWNFDGSSTFQSEGSNSDMYLTPATMF<LDPFHKDPNKLVLCEFIKY |
Parental | NRKPAETNLRYTCRRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRD |
N.KPAETNL..TC...M.MVSNQHP.F..EQEYTLM.TDG..FGWPSN..PGPQ..YY.GVG.D.AYGR. | |
Retrocopy | NQKPAETNLKHTCKWKMEMVSNQHPRFEIEQEYTLMRTDGNSFGWPSNDYPGPQDAYYYGVGTDKAYGRN |
Parental | IVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILH |
I.EAHY.A.LY..IKI...NAEVM..QWEFQIGP.EG....D.LWV...ILH | |
Retrocopy | IMEAHYQA*LYVQIKIVDMNAEVMSTQWEFQIGPSEGVIKRDNLWVIYYILH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |