RetrogeneDB ID: | retro_etel_23 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_173796:5542..6439(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000013015 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004900 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.62 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGILSF |
MTDAAVSFAKDFLAG.VAAAISKTAV.PIERVKLLLQVQHASKQITAD..YKGIIDCVVRIPKEQG.LSF | |
Retrocopy | MTDAAVSFAKDFLAGRVAAAISKTAVVPIERVKLLLQVQHASKQITADQHYKGIIDCVVRIPKEQGVLSF |
Parental | WRGNLANVIR-FPTQALNFAFK-KHKQIFLDGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTR |
WRGNLANVIR.FPTQALNFAFK.K..QIFL.GVDKRTQFWRYFAGNLASG.AAGATSLCFVYPLDFA.TR | |
Retrocopy | WRGNLANVIRYFPTQALNFAFKDKYQQIFLGGVDKRTQFWRYFAGNLASGSAAGATSLCFVYPLDFAHTR |
Parental | LAADVGKAGAEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHI |
LA.DVGKAG.E.EFKGLGDCLVKITKSDGIRGLYQGFNVSVQG.IIYRAAYFGIYDTA..MLPDPKNTHI | |
Retrocopy | LAVDVGKAGTEWEFKGLGDCLVKITKSDGIRGLYQGFNVSVQGMIIYRAAYFGIYDTARRMLPDPKNTHI |
Parental | FVSWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTVDCWRKIARDEGSKAFFKGAWSNVLR |
FVSWMIAQSVTAVAGLTSYPFDT..RRMMMQSGRKGTDIMYTGT.DCWRKIARDEGSK.FFKGAWSNVLR | |
Retrocopy | FVSWMIAQSVTAVAGLTSYPFDTLHRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGSKSFFKGAWSNVLR |
Parental | GMGGAFVLVLYDEIKKYT |
GMGGAFVLVLYDEIKKYT | |
Retrocopy | GMGGAFVLVLYDEIKKYT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |