Parental gene:

Slc25a5, ENSRNOG00000039980

Aliases:Slc25a5, Ant2
Description:ADP/ATP translocase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09073]
Organism:Rat (Rattus norvegicus)
Coordinates:X:123549682..123552808(+)


>ENSRNOG00000039980
ATGACAGATGCCGCTGTGTCCTTCGCCAAGGACTTCTTGGCTGGTGGAGTGGCCGCGGCCATCTCCAAGACGGCGGTAGC
ACCCATCGAGCGGGTCAAGCTGCTGCTGCAGGTGCAGCACGCCAGCAAGCAAATCACGGCAGATAAGCAATACAAGGGCA
TCATAGACTGCGTGGTTCGTATCCCCAAGGAACAGGGAGTCCTGTCCTTCTGGCGTGGCAACCTGGCCAATGTCATCAGA
TACTTCCCCACCCAGGCTCTCAACTTCGCCTTCAAAGATAAATACAAGCAGATCTTTTTGGGTGGTGTGGACAAGAGGAC
CCAGTTTTGGCGGTACTTTGCAGGGAACCTGGCATCAGGTGGTGCTGCTGGGGCCACATCCTTGTGCTTTGTGTACCCTC
TTGATTTTGCCCGTACCCGTCTAGCAGCTGATGTGGGCAAAGCTGGAGCTGAAAGGGAATTCAAAGGCCTTGGTGACTGC
CTGGTTAAGATCTACAAATCTGATGGGATTAAGGGCCTGTACCAAGGCTTTAATGTGTCAGTGCAGGGCATTATCATCTA
CCGTGCTGCCTACTTCGGTATCTATGACACTGCAAAGGGAATGCTCCCGGATCCCAAGAATACTCACATCTTCATCAGCT
GGATGATTGCACAGTCTGTCACTGCTGTTGCTGGCCTAACTTCTTATCCTTTTGACACGGTTCGCCGTCGTATGATGATG
CAGTCTGGACGCAAAGGAACTGATATCATGTATACAGGCACGCTTGACTGCTGGCGGAAGATCGCTCGAGACGAAGGAGG
CAAGGCCTTTTTCAAGGGTGCATGGTCCAACGTTCTCAGAGGCATGGGTGGTGCCTTTGTGCTTGTCTTGTATGATGAAA
TCAAGAAGTACACATAA

Library Parental gene expression (RPM)
SRP017611_brain 107 .56 RPM
SRP017611_kidney 537 .81 RPM
SRP017611_liver 136 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000143 possible_ortholog 1 retrogene
retro_amel_1291,
Canis familiaris ENSCAFG00000018384 possible_ortholog 2 retrogenes
retro_cfam_1473, retro_cfam_1641,
Callithrix jacchus ENSCJAG00000005125 possible_ortholog 1 retrogene
retro_cjac_373,
Dasypus novemcinctus ENSDNOG00000008384 possible_ortholog 1 retrogene
retro_dnov_1894,
Echinops telfairi ENSETEG00000004900 ortholog_many2many 2 retrogenes
retro_etel_23, retro_etel_48,
Felis catus ENSFCAG00000007057 possible_ortholog 2 retrogenes
retro_fcat_1035, retro_fcat_127,
Homo sapiens ENSG00000005022 possible_ortholog 7 retrogenes
retro_hsap_2243, retro_hsap_3132, retro_hsap_3336, retro_hsap_3516, retro_hsap_3715, retro_hsap_3730, retro_hsap_4239,
Gorilla gorilla ENSGGOG00000014279 possible_ortholog 8 retrogenes
retro_ggor_1673, retro_ggor_1674, retro_ggor_2146, retro_ggor_2377, retro_ggor_2512, retro_ggor_2517, retro_ggor_2840, retro_ggor_941,
Loxodonta africana ENSLAFG00000029398 possible_ortholog 1 retrogene
retro_lafr_844,
Microcebus murinus ENSMICG00000002757 possible_ortholog 3 retrogenes
retro_mmur_322, retro_mmur_411, retro_mmur_974,
Myotis lucifugus ENSMLUG00000015742 possible_ortholog 4 retrogenes
retro_mluc_139, retro_mluc_1580, retro_mluc_2564, retro_mluc_86,
Macaca mulatta ENSMMUG00000022663 possible_ortholog 6 retrogenes
retro_mmul_1022, retro_mmul_1287, retro_mmul_1699, retro_mmul_1775, retro_mmul_1800, retro_mmul_2090,
Mus musculus ENSMUSG00000016319 ortholog_one2many 4 retrogenes
retro_mmus_1173, retro_mmus_1955, retro_mmus_2589, retro_mmus_459,
Nomascus leucogenys ENSNLEG00000014852 possible_ortholog 7 retrogenes
retro_nleu_131, retro_nleu_1314, retro_nleu_1383, retro_nleu_1679, retro_nleu_2253, retro_nleu_2560, retro_nleu_3105,
Oryctolagus cuniculus ENSOCUG00000013268 possible_ortholog 11 retrogenes
retro_ocun_1002, retro_ocun_1233, retro_ocun_1457, retro_ocun_1694, retro_ocun_1705, retro_ocun_1862, retro_ocun_1877, retro_ocun_1890, retro_ocun_1932, retro_ocun_610, retro_ocun_708,
Otolemur garnettii ENSOGAG00000010008 possible_ortholog 7 retrogenes
retro_ogar_1131, retro_ogar_1275, retro_ogar_1669, retro_ogar_2161, retro_ogar_2408, retro_ogar_2450, retro_ogar_2474,
Pongo abelii ENSPPYG00000020669 possible_ortholog 5 retrogenes
retro_pabe_1006, retro_pabe_2587, retro_pabe_3130, retro_pabe_3141, retro_pabe_3398,
Pteropus vampyrus ENSPVAG00000014924 possible_ortholog 2 retrogenes
retro_pvam_1118, retro_pvam_911,
Ictidomys tridecemlineatus ENSSTOG00000020438 possible_ortholog 3 retrogenes
retro_itri_314, retro_itri_532, retro_itri_868,
Tupaia belangeri ENSTBEG00000006008 ortholog_many2many 4 retrogenes
retro_tbel_1558, retro_tbel_1860, retro_tbel_4654, retro_tbel_4661,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_721 92.28 100.00
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2. retro_rnor_722 93.63 89.60
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3. retro_rnor_723 92.28 100.00
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4. retro_rnor_1242 80.57 82.21
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5. retro_rnor_1364 95.99 100.00
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6. retro_rnor_1475 89.75 94.30
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7. retro_rnor_1612 93.45 76.51
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8. retro_rnor_1904 96.32 100.00
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9. retro_rnor_1922 72.80 83.56
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10. retro_rnor_2533 93.96 100.00
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11. retro_rnor_2758 91.41 85.91
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Download FASTA sequences of all ENSRNOG00000039980 retrocopies