RetrogeneDB ID: | retro_etel_48 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_201129:9309..10206(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000007025 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004900 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.51 % |
Parental protein coverage: | 99.32 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGILSF |
MTD.A.SFAKDFLAGG.AAAISKTAVAPIERVKLLLQVQHASKQI..D.QYKGI.DC.VRIP.EQG.LSF | |
Retrocopy | MTDQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAVDQQYKGIVDCIVRIPREQGVLSF |
Parental | WRGNLANVIR-FPTQALNFAFK-KHKQIFLDGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTR |
WRGNLANVIR.FPTQALNFAFK.K.KQ.FL.GVDK.TQFWRYFAGNLASGGAA.ATSLCFVYPLDFARTR | |
Retrocopy | WRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKHTQFWRYFAGNLASGGAASATSLCFVYPLDFARTR |
Parental | LAADVGKAGAEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHI |
LAADVGK.G.EREFKGLGDCLVKI..SDGIRGLYQGFNVSVQGIIIYRAAYFG.YDTAKGMLPDPKNTHI | |
Retrocopy | LAADVGKSGTEREFKGLGDCLVKISRSDGIRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHI |
Parental | FVSWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTVDCWRKIARDEGSKAFFKGAWSNVLR |
.VSWMIAQ.VTAVAG..SYPFDTVRRRMMMQSGRKG.DIMYTGT..CWRKI..DEG.KAFFKGAWSNVLR | |
Retrocopy | VVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTLHCWRKIFQDEGGKAFFKGAWSNVLR |
Parental | GMGGAFVLVLYDEIKK |
GMGGAFVLV.YDE.KK | |
Retrocopy | GMGGAFVLVIYDELKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |