Parental gene:

ENSOGAG00000010008

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873629.1:2778363..2781187(+)


>ENSOGAG00000010008
TGCAGTCGCGTGCCTCCCCTCTCTTTCAACATGACAGATGCCGCTGTGTCCTTCATCAAGGACTTCCTGGCAGGTGGAGT
GGCCGCGGCCATCTCCAAGACCGCGGTAGCGCCCATCGAGCGAGTCAAGCTGCTGCTGCAGGTGCAGCATGCCAGCAAGC
AAATCACCGCAGATAAGCAATACAAGGGCATCATCGACTGCGTGGTCCGTATCCCCAAGGAGCAGGGAGTCCTGTCCTTC
TGGCGTGGTAACCTGGCCAATGTCATCCGTTACTTCCCCACCCAGGCTCTCAACTTTGCCTTCAAAGATAAATACAAGCA
GATCTTCCTGGGTGGTGTGGACAAGAGGACCCAGTTCTGGCGCTACTTCGCAGGGAATCTGGCATCAGGTGGTGCCGCTG
GGGCCACATCCTTGTGTTTTGTGTACCCTCTCGATTTTGCTCGTACCCGTCTAGCAGCTGATGTGGGTAAAGCTGGAGCG
GAAAGAGAATTCAAAGGCCTTGGCGACTGCCTGGTTAAGATCTACAAATCTGATGGGCTTAGGGGCCTGTACCAAGGCTT
TAACGTGTCTGTCCAGGGTATTATCATCTACCGAGCTGCCTACTTCGGTATCTATGATACTGCAAAGGGAATGCTTCCAG
ATCCCAAGAATACTCACATCATTGTCAGTTGGATGATTGCACAGTCTGTCACTGCCGTTGCTGGGTTGACTTCCTATCCG
TTTGACACTGTTCGCCGTCGCATGATGATGCAGTCAGGGCGCAAAGGAACTGACATCATGTATACTGGCACGGTTGACTG
CTGGAGGAAGATCCTGCGTGATGAAGGAGGCAAAGCTTTTTTCAAGGGTGCATGGTCCAATGTTCTCAGAGGCATGGGTG
GTGCTTTTGTGCTTGTCTTATACGATGAAATCAAGAAGTACACCCATTTCCCTGATGATGATGGGACTCAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000143 ortholog_many2many 1 retrogene
retro_amel_1291,
Canis familiaris ENSCAFG00000018384 ortholog_one2many 2 retrogenes
retro_cfam_1473, retro_cfam_1641,
Callithrix jacchus ENSCJAG00000005125 ortholog_many2many 1 retrogene
retro_cjac_373,
Dasypus novemcinctus ENSDNOG00000008384 ortholog_one2many 1 retrogene
retro_dnov_1894,
Echinops telfairi ENSETEG00000004900 ortholog_many2many 2 retrogenes
retro_etel_23, retro_etel_48,
Felis catus ENSFCAG00000007057 ortholog_many2many 2 retrogenes
retro_fcat_1035, retro_fcat_127,
Homo sapiens ENSG00000005022 ortholog_one2many 7 retrogenes
retro_hsap_2243, retro_hsap_3132, retro_hsap_3336, retro_hsap_3516, retro_hsap_3715, retro_hsap_3730, retro_hsap_4239,
Gorilla gorilla ENSGGOG00000014279 ortholog_many2many 8 retrogenes
retro_ggor_1673, retro_ggor_1674, retro_ggor_2146, retro_ggor_2377, retro_ggor_2512, retro_ggor_2517, retro_ggor_2840, retro_ggor_941,
Loxodonta africana ENSLAFG00000029398 ortholog_one2many 1 retrogene
retro_lafr_844,
Microcebus murinus ENSMICG00000002757 ortholog_one2many 3 retrogenes
retro_mmur_322, retro_mmur_411, retro_mmur_974,
Myotis lucifugus ENSMLUG00000015742 ortholog_many2many 4 retrogenes
retro_mluc_139, retro_mluc_1580, retro_mluc_2564, retro_mluc_86,
Macaca mulatta ENSMMUG00000022663 ortholog_many2many 6 retrogenes
retro_mmul_1022, retro_mmul_1287, retro_mmul_1699, retro_mmul_1775, retro_mmul_1800, retro_mmul_2090,
Mus musculus ENSMUSG00000016319 possible_ortholog 4 retrogenes
retro_mmus_1173, retro_mmus_1955, retro_mmus_2589, retro_mmus_459,
Nomascus leucogenys ENSNLEG00000014852 ortholog_one2many 7 retrogenes
retro_nleu_131, retro_nleu_1314, retro_nleu_1383, retro_nleu_1679, retro_nleu_2253, retro_nleu_2560, retro_nleu_3105,
Oryctolagus cuniculus ENSOCUG00000013268 ortholog_one2many 11 retrogenes
retro_ocun_1002, retro_ocun_1233, retro_ocun_1457, retro_ocun_1694, retro_ocun_1705, retro_ocun_1862, retro_ocun_1877, retro_ocun_1890, retro_ocun_1932, retro_ocun_610, retro_ocun_708,
Otolemur garnettii ENSOGAG00000000963 within_species_paralog 2 retrogenes
retro_ogar_2492, retro_ogar_2499,
Pongo abelii ENSPPYG00000020669 ortholog_one2many 5 retrogenes
retro_pabe_1006, retro_pabe_2587, retro_pabe_3130, retro_pabe_3141, retro_pabe_3398,
Pteropus vampyrus ENSPVAG00000014924 ortholog_one2many 2 retrogenes
retro_pvam_1118, retro_pvam_911,
Rattus norvegicus ENSRNOG00000039980 possible_ortholog 11 retrogenes
retro_rnor_1242, retro_rnor_1364, retro_rnor_1475, retro_rnor_1612, retro_rnor_1904, retro_rnor_1922, retro_rnor_2533, retro_rnor_2758, retro_rnor_721, retro_rnor_722, retro_rnor_723,
Ictidomys tridecemlineatus ENSSTOG00000020438 ortholog_one2many 3 retrogenes
retro_itri_314, retro_itri_532, retro_itri_868,
Tupaia belangeri ENSTBEG00000006008 possible_ortholog 4 retrogenes
retro_tbel_1558, retro_tbel_1860, retro_tbel_4654, retro_tbel_4661,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1131 61.75 66.88
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2. retro_ogar_1275 76.78 82.97
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3. retro_ogar_1669 69.61 56.47
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4. retro_ogar_2161 59.60 60.88
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5. retro_ogar_2408 83.28 96.85
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6. retro_ogar_2450 81.53 69.72
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7. retro_ogar_2474 74.43 68.77
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Download FASTA sequences of all ENSOGAG00000010008 retrocopies