Parental gene: | SLC25A5, ENSOCUG00000013268 |
| Aliases: | None |
| Description: | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:HGNC Symbol;Acc:10991] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | X:68185488..68188624(+) |
>ENSOCUG00000013268
ATGACAGATGCCGCTGTGTCCTTCGCCAAGGACTTTCTGGCAGGTGGAGTGGCTGCGGCCATCTCCAAGACCGCGGTAGC
GCCCATCGAGAGGGTCAAGCTGCTGCTGCAGGTGCAGCATGCCAGCAAGCAAATCACTGCCGATAAGCAATACAAGGGCA
TTATAGACTGCGTGGTTCGTATCCCCAAGGAGCAGGGAGTCCTGTCCTTCTGGCGTGGTAACCTGGCCAATGTCATCAGA
TACTTCCCCACCCAGGCTCTCAACTTTGCCTTCAAAGATAAATACAAGCAGATCTTTCTGGGTGGCGTGGACAAGAGGAC
CCAGTTTTGGCGCTACTTTGCAGGAAATCTGGCATCAGGTGGTGCTGCTGGAGCCACATCCTTGTGTTTCGTGTACCCTC
TTGATTTTGCCCGTACCCGTCTAGCAGCTGACGTGGGCAAAGCTGGAGCTGAAAGGGAATTCAGAGGCCTCGGCGACTGC
CTGGTTAAGATCTACAAATCTGATGGGATTAGGGGCCTGTACCAAGGCTTTAATGTGTCTGTACAGGGCATTATCATCTA
CCGGGCTGCCTACTTCGGTATCTATGACACCGCAAAAGGAATGCTTCCAGATCCCAAGAACACACACATCTTCATCAGCT
GGATGATTGCGCAGTCTGTCACTGCTGTTGCTGGGTTGACTTCCTATCCATTTGACACTGTTCGTCGGCGCATGATGATG
CAGTCGGGGCGTAAAGGAACTGATATCATGTACACAGGCACACTTGACTGCTGGAGGAAGATTGCTCGTGATGAAGGAGG
CAAAGCGTTTTTCAAGGGTGCATGGTCCAACGTCCTCAGAGGCATGGGTGGTGCTTTTGTGCTTGTCTTGTATGATGAAA
TCAAGAAGTTCACATAA
ATGACAGATGCCGCTGTGTCCTTCGCCAAGGACTTTCTGGCAGGTGGAGTGGCTGCGGCCATCTCCAAGACCGCGGTAGC
GCCCATCGAGAGGGTCAAGCTGCTGCTGCAGGTGCAGCATGCCAGCAAGCAAATCACTGCCGATAAGCAATACAAGGGCA
TTATAGACTGCGTGGTTCGTATCCCCAAGGAGCAGGGAGTCCTGTCCTTCTGGCGTGGTAACCTGGCCAATGTCATCAGA
TACTTCCCCACCCAGGCTCTCAACTTTGCCTTCAAAGATAAATACAAGCAGATCTTTCTGGGTGGCGTGGACAAGAGGAC
CCAGTTTTGGCGCTACTTTGCAGGAAATCTGGCATCAGGTGGTGCTGCTGGAGCCACATCCTTGTGTTTCGTGTACCCTC
TTGATTTTGCCCGTACCCGTCTAGCAGCTGACGTGGGCAAAGCTGGAGCTGAAAGGGAATTCAGAGGCCTCGGCGACTGC
CTGGTTAAGATCTACAAATCTGATGGGATTAGGGGCCTGTACCAAGGCTTTAATGTGTCTGTACAGGGCATTATCATCTA
CCGGGCTGCCTACTTCGGTATCTATGACACCGCAAAAGGAATGCTTCCAGATCCCAAGAACACACACATCTTCATCAGCT
GGATGATTGCGCAGTCTGTCACTGCTGTTGCTGGGTTGACTTCCTATCCATTTGACACTGTTCGTCGGCGCATGATGATG
CAGTCGGGGCGTAAAGGAACTGATATCATGTACACAGGCACACTTGACTGCTGGAGGAAGATTGCTCGTGATGAAGGAGG
CAAAGCGTTTTTCAAGGGTGCATGGTCCAACGTCCTCAGAGGCATGGGTGGTGCTTTTGTGCTTGTCTTGTATGATGAAA
TCAAGAAGTTCACATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .63 RPM |
| SRP017611_kidney | 231 .19 RPM |
| SRP017611_brain | 40 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000143 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000018384 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005125 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008384 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004900 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000007057 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000005022 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014279 | ortholog_one2many | 8 retrogenes | |
| Loxodonta africana | ENSLAFG00000029398 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002757 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000015742 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000022663 | ortholog_one2many | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014852 | ortholog_one2one | 7 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002594 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010008 | ortholog_one2many | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000020669 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000014924 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000039980 | possible_ortholog | 11 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000020438 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000006008 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_610 | 99.33 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_708 | 96.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1002 | 95.97 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1233 | 97.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ocun_1457 | 93.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ocun_1694 | 70.32 | 51.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ocun_1705 | 98.66 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ocun_1862 | 89.36 | 93.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ocun_1877 | 98.66 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ocun_1890 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ocun_1932 | 62.02 | 69.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000013268 retrocopies