RetrogeneDB ID: | retro_meug_1398 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold3905:42547..43069(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2C | ||
Ensembl ID: | ENSMEUG00000007177 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937] |
Percent Identity: | 79.1 % |
Parental protein coverage: | 97.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MASQNRDPAAASAAAARKGAEPGTSAARGSV-GKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGA |
M..QNRDPA.AS....RK.A.PG...AR.S..GK.L..E.M.LMMSGDKGISAFPESDNLFKWVGTI.GA | |
Retrocopy | MTLQNRDPADASNTT-RKKATPGVGTARRSG<GKSL*KEFMILMMSGDKGISAFPESDNLFKWVGTINGA |
Parental | AGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLL |
AGTVYEDLRYKLSLEFP.GY.YNA..VKF.TPCYHPNVDTQGNICLDILKDK.SALYDVRTILLSIQSLL | |
Retrocopy | AGTVYEDLRYKLSLEFPGGYLYNAIIVKFITPCYHPNVDTQGNICLDILKDKCSALYDVRTILLSIQSLL |
Parental | GEPNIDSPLNTHAAELWTNPT-AFKKYLQEAYMKQET |
.EP.ID.PL.T.AA..WTNPT.AFKKYL.EAYMKQ.T | |
Retrocopy | EEPDIDNPLKTPAAKPWTNPT>AFKKYLLEAYMKQVT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |