RetrogeneDB ID: | retro_meug_334 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold10232:33194..33566(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2C | ||
Ensembl ID: | ENSMEUG00000007177 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937] |
Percent Identity: | 80.65 % |
Parental protein coverage: | 68.89 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDTQGNICLDILKDKWSAL |
S.NLF.W.GTI..AA..VYEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVD..GNICLDILKDKWSAL | |
Retrocopy | SQNLFRWFGTIDEAAE*VYEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDI*GNICLDILKDKWSAL |
Parental | YDVRTILLSIQSLLGEPNIDSPLNTHAAELWTNPTAFKKYLQEAYMKQETSKHP |
YD.RTILLS.QSLL..PN..SPLNTHAAELWT.PT.FK.YL...YMKQ.TS..P | |
Retrocopy | YDIRTILLSMQSLLEKPNMGSPLNTHAAELWTKPTVFKHYLLKTYMKQMTSQEP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |