RetrogeneDB ID: | retro_meug_1711 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold54223:9090..9457(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSMEUG00000006820 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 55.65 % |
Parental protein coverage: | 62.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | DTKIGYIVPNFRVTVVMVDGKFKDISLSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQV |
...IG..VPNF..TVV...G..KDI...DY.KG....L..YPLDFTF.CPTEII.FSD....FKKL.CQV | |
Retrocopy | NVRIGHPVPNFKATVVTPAGQVKDINIFDY>KGNIRYLS-YPLDFTFICPTEIIMFSDYERIFKKLHCQV |
Parental | IGASVDSHFCHLAWVNTVKKNGGLGAVNIPLMSDPKRTIAQDYGILKEDEGISF |
IGASVDSHF..L..VNT......L...NI.L..D.K..IAQ....LK.DE.I.F | |
Retrocopy | IGASVDSHFRRLT*VNTPQNQSRLETINISLTCDTKCSIAQVNRVLKADERILF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |