RetrogeneDB ID: | retro_etel_367 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6199:32927..33524(+) | ||
Located in intron of: | ENSETEG00000006344 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSETEG00000007922 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 97.99 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSSGTAKIGHPAPNFKATAVMPDGQFKDISLTDYKGKYIVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN |
MSSGTAKIGHPAPNFKATAVMPDGQFKDISLTDYKGKYIVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN | |
Retrocopy | MSSGTAKIGHPAPNFKATAVMPDGQFKDISLTDYKGKYIVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN |
Parental | CQVIGASVDSHFCHLAWINTPKKEGGLGPMNIPLVSDSKRTIAQDYGVLKVDEGISFRGLFIIDDKGILR |
CQVIGASVDSHFCHLAWINTPKKEGGLGPMNIPLVSD.KRTIAQDYGVLKVDEGISFRGLFIIDDKGILR | |
Retrocopy | CQVIGASVDSHFCHLAWINTPKKEGGLGPMNIPLVSDPKRTIAQDYGVLKVDEGISFRGLFIIDDKGILR |
Parental | QITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSREYFAKQK |
QITVNDLPVGR.VDETLRLVQAFQFTD.HG.VCPAGWKPGSDTIKPDVQKSREYFAKQK | |
Retrocopy | QITVNDLPVGRFVDETLRLVQAFQFTDEHGAVCPAGWKPGSDTIKPDVQKSREYFAKQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |