RetrogeneDB ID: | retro_tbel_4669 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_97404:46493..46919(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSTBEG00000015997 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 96.48 % |
Parental protein coverage: | 83.04 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGP |
SL.DYKGKYVVFFFYPLDFTFVCPTEIIAFSD.AEEFKKLNCQ.IGASVDSHFCHLAWINTPKKQGGLGP | |
Retrocopy | SLTDYKGKYVVFFFYPLDFTFVCPTEIIAFSDTAEEFKKLNCQLIGASVDSHFCHLAWINTPKKQGGLGP |
Parental | MNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKH |
MNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGIL.QIT.NDLPVGRSVDETLRLVQAFQFTDKH | |
Retrocopy | MNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILQQITANDLPVGRSVDETLRLVQAFQFTDKH |
Parental | GE |
GE | |
Retrocopy | GE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |