RetrogeneDB ID: | retro_mluc_1109 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429796:1731420..1731729(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000012200 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.11 % |
Parental protein coverage: | 56.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EPPKGAHFLAKSLDDALKLIEEPELTNQVDMVWIVGGSSVYKEAMSKPGHQRLFVTRIMQEFESDTFF-P |
EP.KGAHFLAKSLDDALKLIEEPELTN.VDM.WIVGGS.VYKEAM.K.GH.R.F.TR.MQ.....TFF.P | |
Retrocopy | EPLKGAHFLAKSLDDALKLIEEPELTNKVDMAWIVGGSFVYKEAMNKLGHHRFFLTRMMQD----TFFSP |
Parental | EIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKNE |
EIDLEKYKLLPEYPGVLSDVQEEKGIKYK.EVYEKNE | |
Retrocopy | EIDLEKYKLLPEYPGVLSDVQEEKGIKYKYEVYEKNE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000015750 | 2 retrocopies | |
Bos taurus | ENSBTAG00000007681 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000019556 | 4 retrocopies | |
Equus caballus | ENSECAG00000026827 | 1 retrocopy | |
Felis catus | ENSFCAG00000026745 | 3 retrocopies | |
Homo sapiens | ENSG00000228716 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000022366 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000012200 | 2 retrocopies |
retro_mluc_1109 , retro_mluc_2577,
|
Macaca mulatta | ENSMMUG00000018283 | 13 retrocopies | |
Monodelphis domestica | ENSMODG00000024860 | 3 retrocopies | |
Mustela putorius furo | ENSMPUG00000008704 | 1 retrocopy | |
Mus musculus | ENSMUSG00000021707 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000012989 | 3 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000005127 | 3 retrocopies | |
Otolemur garnettii | ENSOGAG00000025320 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000015600 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000017042 | 3 retrocopies | |
Rattus norvegicus | ENSRNOG00000013521 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000014125 | 2 retrocopies |