RetrogeneDB ID: | retro_mluc_2233 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430132:54973..55313(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POLR3G | ||
Ensembl ID: | ENSMLUG00000014954 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.34 % |
Parental protein coverage: | 51.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | REMMPRKKFK-KAGPKSKKVNDTGKDTSLTNTADVL-KKIEELEKRGDGEKSDEENEEKEGSKEKSKEDE |
.EM.PRKK.K.KAGPKSKK.NDTGKDTSL.NT..VL.KK.....K.GDG.K..EE.EE.EG.KEK.K.D. | |
Retrocopy | QEMIPRKKYK>KAGPKSKKLNDTGKDTSLINTDNVL>KKLRNW-KTGDGGKFNEESEEQEGRKEKGKKDP |
Parental | EEEEDDAAEQEEYDEEEQEEENDYINSYFDNGDDFI-VDSDDNMDEAT |
..EEDD..E.EEYDEEEQEEENDYI.SYFD.GDDF...DSDDNMDE.T | |
Retrocopy | DHEEDDTGE-EEYDEEEQEEENDYIHSYFDTGDDFL<ADSDDNMDEVT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000006306 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000010747 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008379 | 1 retrocopy | |
Homo sapiens | ENSG00000113356 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000000266 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000014954 | 1 retrocopy |
retro_mluc_2233 ,
|
Myotis lucifugus | ENSMLUG00000016931 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000018972 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000013749 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000005560 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000015624 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000017068 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000016260 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000008664 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000002278 | 2 retrocopies |