RetrogeneDB ID: | retro_mluc_2618 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL432040:9834..10659(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000026231 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RNPS1 | ||
Ensembl ID: | ENSMLUG00000016808 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 97.47 % |
Parental protein coverage: | 90.16 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS |
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS | |
Retrocopy | MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS |
Parental | GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR-HDNRRRSRS |
GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASS.SGSSSTS.SSSSSSSSGSPSPSRRR..DNRRRSRS | |
Retrocopy | GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSHSGSSSTSQSSSSSSSSGSPSPSRRR>NDNRRRSRS |
Parental | KSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVE |
KSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMID.PVERMHPHLSKGYAYVE | |
Retrocopy | KSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDKPVERMHPHLSKGYAYVE |
Parental | FENPDEAEKALKHMDGGQIDGQEITATAVLA-PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSR |
FENPDEAEKALKHMDGGQIDGQEITATAVLA.PWPRPPPRRFSPPRRMLPPPPMWRRSPP.MRRRSR | |
Retrocopy | FENPDEAEKALKHMDGGQIDGQEITATAVLA<PWPRPPPRRFSPPRRMLPPPPMWRRSPP*MRRRSR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |