RetrogeneDB ID: | retro_mputfur_683 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896934.1:2140802..2141129(-) | ||
Located in intron of: | ENSMPUG00000018047 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFA5 | ||
Ensembl ID: | ENSMPUG00000006811 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 [Source:HGNC Symbol;Acc:7688] |
Percent Identity: | 77.27 % |
Parental protein coverage: | 94.83 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | LLKKTTGLVGLAVCESPHERLRILYTKILDVLEQIPKNAAYRKYTEQITNEKLSMVKAEPDVKKLEDQLQ |
.L.KTT.L..LAVCE..H.RLR.LYTKILDVLEQIP..AAYR.YTEQITNE.LSM.KAEPDVKKLE.QLQ | |
Retrocopy | VLLKTTSLERLAVCET-HKRLRLLYTKILDVLEQIPTSAAYRNYTEQITNE*LSMLKAEPDVKKLEAQLQ |
Parental | CGQLEEVILQAENELSLARKMLQWKPWEPLVEEPPANQWK |
CGQLEE.IL.A.NELSLARK..QW..WE.LVEEPPAN..K | |
Retrocopy | CGQLEEMIL*AGNELSLARKIMQWESWELLVEEPPANK*K |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000004512 | 2 retrocopies | |
Bos taurus | ENSBTAG00000009334 | 5 retrocopies | |
Canis familiaris | ENSCAFG00000025112 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000017449 | 1 retrocopy | |
Felis catus | ENSFCAG00000027125 | 5 retrocopies | |
Homo sapiens | ENSG00000128609 | 10 retrocopies | |
Gorilla gorilla | ENSGGOG00000022922 | 9 retrocopies | |
Loxodonta africana | ENSLAFG00000030971 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000015384 | 4 retrocopies | |
Mustela putorius furo | ENSMPUG00000006811 | 4 retrocopies | |
Mus musculus | ENSMUSG00000023089 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000033137 | 6 retrocopies | |
Pongo abelii | ENSPPYG00000017956 | 10 retrocopies | |
Pan troglodytes | ENSPTRG00000019637 | 10 retrocopies | |
Rattus norvegicus | ENSRNOG00000005698 | 3 retrocopies | |
Sus scrofa | ENSSSCG00000016607 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000027404 | 1 retrocopy |