Parental gene: | NDUFA5, ENSPPYG00000017956 |
| Aliases: | None |
| Description: | NADH dehydrogenase [Source:RefSeq peptide;Acc:NP_001125332] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:120311863..120328933(-) |
>ENSPPYG00000017956
ATGGCGGGTGTGCTGAAGAAGACCACTGGCCTTGTGGGATTGGCTGTCTGCAATACTCCTCACGAGAGGCTAAGAATATT
GTACACAAAGATTCTTGATGTTCTTGAGGAAATCCCTAAAAATGCAGCATATAGAAAGTATACAGAACAGATTACAAATG
AGAAGCTGGCTATGGTTAAAGCGGAACCAGATGTTAAAAAATTAGAAGACCAACTTCAAGGCGGTCAATTAGAAGAGGTG
ATTCTTCAGGCTGAACATGAACTAAATCTGGCAAGAAAAATGAAGGAATGGAAACTATGGGAGCCATTAGTGGAAGAGCC
TCCTGCCGATCAGTGGAAATGGCCAATATAA
ATGGCGGGTGTGCTGAAGAAGACCACTGGCCTTGTGGGATTGGCTGTCTGCAATACTCCTCACGAGAGGCTAAGAATATT
GTACACAAAGATTCTTGATGTTCTTGAGGAAATCCCTAAAAATGCAGCATATAGAAAGTATACAGAACAGATTACAAATG
AGAAGCTGGCTATGGTTAAAGCGGAACCAGATGTTAAAAAATTAGAAGACCAACTTCAAGGCGGTCAATTAGAAGAGGTG
ATTCTTCAGGCTGAACATGAACTAAATCTGGCAAGAAAAATGAAGGAATGGAAACTATGGGAGCCATTAGTGGAAGAGCC
TCCTGCCGATCAGTGGAAATGGCCAATATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .16 RPM |
| SRP007412_cerebellum | 33 .56 RPM |
| SRP007412_heart | 40 .43 RPM |
| SRP007412_kidney | 30 .40 RPM |
| SRP007412_liver | 10 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004512 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000009334 | ortholog_one2one | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000025112 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000017449 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000027125 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000128609 | ortholog_one2one | 10 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022922 | ortholog_one2one | 9 retrogenes | |
| Loxodonta africana | ENSLAFG00000030971 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015384 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000006811 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000023089 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033137 | ortholog_one2one | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000019637 | ortholog_one2one | 10 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005698 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000016607 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027404 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_887 | 67.71 | 81.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1389 | 93.97 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2216 | 66.18 | 57.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2666 | 67.65 | 86.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2794 | 96.40 | 95.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2795 | 94.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_2975 | 78.07 | 98.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_3283 | 76.85 | 92.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_3390 | 72.63 | 81.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pabe_3728 | 93.81 | 97.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000017956 retrocopies