Parental gene: | NDUFA5, ENSPTRG00000019637 |
| Aliases: | None |
| Description: | Pan troglodytes NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa (NDUFA5), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001071797] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 7:125070875..125087754(-) |
>ENSPTRG00000019637
ATGGCGGGTGTGCTGAAGAAGACCACTGGCCTTGTGGGATTGGCTGTGTGCAATACTCCTCACGAGAGGCTAAGAATATT
GTACACAAAGATTCTTGATGTTCTTGAGGAAATCCCTAAAAATGCAGCATATAGAAAGTATACAGAACAGATTACAAATG
AGAAGCTGGCTATGGTTAAAGCGGAACCAGATGTTAAAAAATTAGAAGACCAACTTCAAGGCGGTCAATTAGAAGAGGTG
ATTCTTCAGGCTGAACATGAACTAAATCTGGCAAGAAAAATGAGGGAATGGAAACTATGGGAGCCATTAGTGGAAGAGCC
TCCTGCCGATCAGTGGAAATGGCCAATATAA
ATGGCGGGTGTGCTGAAGAAGACCACTGGCCTTGTGGGATTGGCTGTGTGCAATACTCCTCACGAGAGGCTAAGAATATT
GTACACAAAGATTCTTGATGTTCTTGAGGAAATCCCTAAAAATGCAGCATATAGAAAGTATACAGAACAGATTACAAATG
AGAAGCTGGCTATGGTTAAAGCGGAACCAGATGTTAAAAAATTAGAAGACCAACTTCAAGGCGGTCAATTAGAAGAGGTG
ATTCTTCAGGCTGAACATGAACTAAATCTGGCAAGAAAAATGAGGGAATGGAAACTATGGGAGCCATTAGTGGAAGAGCC
TCCTGCCGATCAGTGGAAATGGCCAATATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 37 .93 RPM |
| SRP007412_cerebellum | 25 .74 RPM |
| SRP007412_heart | 72 .17 RPM |
| SRP007412_kidney | 33 .79 RPM |
| SRP007412_liver | 13 .98 RPM |
| SRP007412_testis | 15 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004512 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000009334 | ortholog_one2one | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000025112 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000017449 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000027125 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000128609 | ortholog_one2one | 10 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022922 | ortholog_one2one | 9 retrogenes | |
| Loxodonta africana | ENSLAFG00000030971 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015384 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000006811 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000023089 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033137 | ortholog_one2one | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000017956 | ortholog_one2one | 10 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005698 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000016607 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027404 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_529 | 78.07 | 96.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_725 | 66.67 | 81.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1141 | 96.46 | 97.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1800 | 67.71 | 82.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2235 | 66.67 | 88.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_2452 | 79.82 | 98.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_2682 | 92.11 | 98.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_2714 | 74.36 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ptro_2888 | 76.84 | 81.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ptro_2937 | 66.67 | 88.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000019637 retrocopies