RetrogeneDB ID: | retro_nleu_170 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397261.1:24999926..25000285(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TSN | ||
Ensembl ID: | ENSNLEG00000001202 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.52 % |
Parental protein coverage: | 53.07 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVL-ILASELSRLSVNSVTAGDYSRPLHISTFINE |
LETE...T.EA.TEI..IEPD.EKGFHLDVED.LSGV..ILASEL.RLS.N..TAGD.S..LH..TF.NE | |
Retrocopy | LETE---TPEAITEIHVIEPDMEKGFHLDVEDPLSGVQ<ILASELLRLSLNGMTAGDNSQLLHVTTFNNE |
Parental | LDSGFRLLNLKN-DSLRKRY-DGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK |
....F.LL.L....SLRK.Y.DGL..DVKK.EEV.Y.LSI.GFNKE..A...EK | |
Retrocopy | WHPNFHLLSLRHYSSLRKAYGDGLWWDVKKTEEVFYILSIQGFNKEIEATRAEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000006059 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000025740 | 2 retrocopies | |
Felis catus | ENSFCAG00000027149 | 1 retrocopy | |
Homo sapiens | ENSG00000211460 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000002216 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000012656 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000021119 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000000147 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000001202 | 1 retrocopy |
retro_nleu_170 ,
|
Ornithorhynchus anatinus | ENSOANG00000003457 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000023529 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000030436 | 3 retrocopies | |
Pan troglodytes | ENSPTRG00000012420 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000004395 | 1 retrocopy |