Parental gene:

TSN, ENSDNOG00000025740

Aliases:None
Description:translin [Source:HGNC Symbol;Acc:12379]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4529:58733..65308(+)


>ENSDNOG00000025740
GAAATCCGAAAAGTTGTACAGAGTTTAGAACAAACAGCCCGAGAGATTTTAACACTACTGCAAGGGGTCCATCAGGGTGC
TGGGTTTCAAGACATTCCAAAGAGATGTTTGAAAGCTCGAGAACATTTTGGTACAGTAAAAACACATCTAACATCTCTGA
AGACCAAGTTTCCTGCTGAACAGTACTACAGATTTCACGAGCACTGGAGGTTTGTGTTGCAGCGCTTGGTCTTCTTGGCA
GCATTTGTTGTGTATTTGGAATCAGAAACACTAGTGACTCGAGAAGCGGTTACAGAGATTCTTGGCATTGAGCCAGATCG
GGAGAAAGGATTTCATCTGGATGTAGAAGACTATCTTTCAGGAGTTTTAATTCTTGCTAGTGAACTGTCGCGGCTGTCAG
TCAACAGTGTGACCGCTGGAGACTACTCGCGGCCGCTCCACATCTCCACCTTCATCAATGAGCTGGATTCTGGTTTCCGC
CTTCTCAACCTGAAGAATGATTCCCTGAGGAAGCGCTATGATGGCCTGAAGTATGATGTGAAGAAAGTTGAAGAGGTGGT
CTACGATCTCTCGATCCGTGGCTTCAATAAGGAAACGGCTGCTGCTTGTGTGGATAAATAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 11 .08 RPM
SRP012922_cerebellum 12 .37 RPM
SRP012922_heart 3 .25 RPM
SRP012922_kidney 6 .30 RPM
SRP012922_liver 5 .73 RPM
SRP012922_lung 8 .71 RPM
SRP012922_quadricep_muscle 3 .81 RPM
SRP012922_spleen 11 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006059 ortholog_one2one 1 retrogene
retro_btau_1598,
Felis catus ENSFCAG00000027149 ortholog_one2one 1 retrogene
retro_fcat_1577,
Homo sapiens ENSG00000211460 ortholog_one2one 1 retrogene
retro_hsap_3760,
Gorilla gorilla ENSGGOG00000002216 ortholog_one2one 2 retrogenes
retro_ggor_2528, retro_ggor_2610,
Myotis lucifugus ENSMLUG00000012656 ortholog_one2one 1 retrogene
retro_mluc_1420,
Macaca mulatta ENSMMUG00000021119 ortholog_one2one 1 retrogene
retro_mmul_1718,
Monodelphis domestica ENSMODG00000000147 ortholog_one2one 1 retrogene
retro_mdom_1896,
Nomascus leucogenys ENSNLEG00000001202 ortholog_one2one 1 retrogene
retro_nleu_170,
Ornithorhynchus anatinus ENSOANG00000003457 ortholog_one2one 1 retrogene
retro_oana_120,
Oryctolagus cuniculus ENSOCUG00000023529 ortholog_one2one 1 retrogene
retro_ocun_271,
Otolemur garnettii ENSOGAG00000030436 ortholog_one2one 3 retrogenes
retro_ogar_1221, retro_ogar_2875, retro_ogar_3426,
Pan troglodytes ENSPTRG00000012420 ortholog_one2one 1 retrogene
retro_ptro_2551,
Tarsius syrichta ENSTSYG00000004395 ortholog_one2one 1 retrogene
retro_tsyr_1593,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_907 75.47 50.49
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2. retro_dnov_1581 72.18 63.11
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Download FASTA sequences of all ENSDNOG00000025740 retrocopies