RetrogeneDB ID: | retro_nleu_653 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397269.1:37997329..37997569(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHF5A | ||
Ensembl ID: | ENSNLEG00000015481 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85. % |
Parental protein coverage: | 98.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAY |
MAKHHP.LIFC.K.AGV.IGRLCEKCD.KCVICDS.V.PCTLV.ICDECNY.SYQG.CVICGGPGVS.AY | |
Retrocopy | MAKHHPNLIFCCKPAGVVIGRLCEKCDSKCVICDSFVCPCTLVCICDECNYVSYQGCCVICGGPGVSGAY |
Parental | YCKECTIQEK |
YCKECTIQE. | |
Retrocopy | YCKECTIQEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000015687 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000001090 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000004999 | 3 retrocopies | |
Echinops telfairi | ENSETEG00000010741 | 1 retrocopy | |
Latimeria chalumnae | ENSLACG00000012094 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000013520 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000016398 | 2 retrocopies | |
Mus musculus | ENSMUSG00000061360 | 3 retrocopies | |
Nomascus leucogenys | ENSNLEG00000015481 | 2 retrocopies |
retro_nleu_1205, retro_nleu_653 ,
|
Oryctolagus cuniculus | ENSOCUG00000012705 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000002839 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000001162 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000024170 | 3 retrocopies | |
Tarsius syrichta | ENSTSYG00000001082 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000003369 | 1 retrocopy |