RetrogeneDB ID: | retro_tsyr_259 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_655:17817..18147(-) | ||
Located in intron of: | ENSTSYG00000002259 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHF5A | ||
Ensembl ID: | ENSTSYG00000001082 | ||
Aliases: | None | ||
Description: | PHD finger protein 5A [Source:HGNC Symbol;Acc:18000] |
Percent Identity: | 80.91 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKHHPDLIFCRKQAGVXXXXXXXXXDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAY |
MAKHHPDLIFC.KQA.V.........D.KCVIC..YV.PCTLV.ICDE.NYGSYQGRCVICGGPGVS.AY | |
Retrocopy | MAKHHPDLIFCHKQADVAIERVCEKCDSKCVIC*LYVYPCTLVHICDEYNYGSYQGRCVICGGPGVSNAY |
Parental | YCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR |
Y.KECTIQEKDRDGCPKIVNLG.SKTDLFYERKKY.FKKR | |
Retrocopy | YYKECTIQEKDRDGCPKIVNLGNSKTDLFYERKKYSFKKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |